Gene Bphyt_4060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4060 
Symbol 
ID6278602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp77907 
End bp78833 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content60% 
IMG OID642615161 
Producthypothetical protein 
Protein accessionYP_001887814 
Protein GI187918783 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4932] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCGA TGGGGGTGGA GGAGGTGCCT GAAGTACCGG AGGTGCCCGA AGTACCCGAG 
GTGCCCGAAG TACCCGAGGT GCCCGAAGTA CCCGAGGTGC CCGAAGTACC CGAGGTGCCC
GAAGTACCCG AGGTGCCCGA AGTACCCGAG GTGCCCGAAG TGCCCGAAGT ACCGGAGGTG
CCTGAAGTAC CCGAGGTGCC CGAAGTACCC GAAGTACCCG AGGTACCCGA GGTACCCGAG
GTGCCCGAGG TGCCCGAAGT ACCCGAAGTA CCCGAAGTAC CCGAAGTACC CGAAGTACCC
GAAGTACCCG AAGTACCCGA AGTACCCGAA GTACCCGAAG TACCCGAAGT ACCCGAAGTA
CCCGAAGTGC CCGAAGTGCC CGAAGTGCCC GAAGTACCCG AAGTGCCCGA AGTGCCCGAA
GTGCCCGAAG TACCGGAGGT GCCCGAAGTA CCGGAGGTGC CCGAAGTACC GGAGGTGCCT
GAAGTCCCGG AGGTGCCCGA AGTCCCCGAA GTCCCCGAAG TCCCCGAAGT CCCCGAAGTC
CCCGACCCCG ACGTACCACC CAAACCGCCA CCGCCGAGTC CGGGACTTGG GGTGTTAAGC
GTTGATCCGC ATCCGTACAG CGCGAGTAAT GTAGACGTCG CGACAGCGAT GGCTGTCCGA
CCGGCAAATT TTTTCATGAT GTCCCCGTTG AACGACTATT GGCGGGGACA CTGCTGCAAG
TTGCACGCCA AATGTCATTT ATGGCGTGAT CTTGCTTTCA AAGCGCAGGT ATATCGAAAA
AATAAAACAC AAGAAGAATT TACTCCGACA GAATCCCAAT TTCCGTCTCA ACGACAAACC
CGTGTTCCGC GCGCGTGCTA CGTAACGCGA GCGCAGACCG TAACGGTGCG AAACACGCCG
CAATCATCGC GCAGCACCTT CGCATAG
 
Protein sequence
MLPMGVEEVP EVPEVPEVPE VPEVPEVPEV PEVPEVPEVP EVPEVPEVPE VPEVPEVPEV 
PEVPEVPEVP EVPEVPEVPE VPEVPEVPEV PEVPEVPEVP EVPEVPEVPE VPEVPEVPEV
PEVPEVPEVP EVPEVPEVPE VPEVPEVPEV PEVPEVPEVP EVPEVPEVPE VPEVPEVPEV
PDPDVPPKPP PPSPGLGVLS VDPHPYSASN VDVATAMAVR PANFFMMSPL NDYWRGHCCK
LHAKCHLWRD LAFKAQVYRK NKTQEEFTPT ESQFPSQRQT RVPRACYVTR AQTVTVRNTP
QSSRSTFA