| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4050 |
|---|
| Symbol | |
|---|
| ID | 6280201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 64143 |
|---|
| End bp | 65402 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642615151 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001887804 |
|---|
| Protein GI | 187918773 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTA GCATTGCGTT TGTGCCTTCC TATCGCGAAT CGCAGCTGAC CGGATGGCAT
TCCGTGGGCG CGTGGGCGAT ATCTTTCTCC TATCTGCTAT TTTGCATCAG CGATACGCTT
CTTTCACTTG AAATGGACGG GTCCCAGCTC GTCAAGCTCG GTGCATTTGT CTTGCTGGCC
GTCGCGATTT TGCTTCGCCC GAGATTTCAC AAGCTCATCG CATTGATCGT CCCTTTCATG
TTGGCGCTCT ATATAGCCAT GTGGCGAGCA TTCAACGTCA ATGCGGGTGG GGAAGAGTTT
TTGCGGTTTC TCGCACCCAT GGCGATCACC GTCGCGATAT TCGCGTACAG AAGCAAGCTT
GCGCCGGTCC TCTTCATGTT CTTTGCCGTC GTATTGAGCA ACGATTTATT TCAATGTTAC
TTTTACCTTG CTTATGGATT GAAACTTCCG CTGTTTTTGC CAGTTAAGTT TGATTCGGGT
TTGTATCTGA GGGCACAAGG ATGGATCGGA TTCTTCTCAG AATTCAGTTT CATCAATTTC
TGCGCGTTTC TTGTGTGCCG CCACTACCGG CCGACCCGGC GATCACAGCG AGCGGCGTGG
ATTTTTCTGA CATTTGCCCT CCTGGGAGTC TCATTCAAAA TCTTCGCTAC GATCGCAATG
TATTTCATCG TCGCGAGAAA GCTGACCGTA CGCTCCTTCA TCGCCGCGTT ATCCGCGATT
GGCCTCGTGC TGTTTGCTCT GATGGCGGGG CTGCTTGATT CGTTAATCAA GATCGCAATG
ACCAAGATCT CCTTCTACGT CGTAGCTGGG AATTCGGCGC GCGCGGAGTC GTATCGCGTC
ATGTTCCAGT CGCTGATGAA AGGGAACATT TTCGGTGAAG GGCTCGGCTC CTTTGGTGGA
CCAGCCTCCG TCAAGTACCA CTCACCGCTT TACAGCATCT ATCACTTCAA CTGGTATGGG
CTCGGAAATA CCCTGACGAC TACCGACACG TTCTATCCAC ATCTTTTTGT TGAACTTGGT
GTATTGGGCG CCATCTTGTG GCTCGCATTT ATGCTCCTGT ATGGACAGGT TAGCAAGCGT
CGACGTGTCT GGCTATTTTT GGTCGGTGCG TTTTGCTTCG ACAACATCTT CTCAATGTCA
TTTGTTTCAG CATCCTACGT CTTCTCAGCG CTCATGCTCA TGTATCTGTT TTCTGACAAT
GGGTCCCTGA TCTCGCGACC CCCGTCGGCT GCGGGGAAAC GTGCCGGAGC CATGCGATGA
|
|---|
| Protein sequence | MNASIAFVPS YRESQLTGWH SVGAWAISFS YLLFCISDTL LSLEMDGSQL VKLGAFVLLA
VAILLRPRFH KLIALIVPFM LALYIAMWRA FNVNAGGEEF LRFLAPMAIT VAIFAYRSKL
APVLFMFFAV VLSNDLFQCY FYLAYGLKLP LFLPVKFDSG LYLRAQGWIG FFSEFSFINF
CAFLVCRHYR PTRRSQRAAW IFLTFALLGV SFKIFATIAM YFIVARKLTV RSFIAALSAI
GLVLFALMAG LLDSLIKIAM TKISFYVVAG NSARAESYRV MFQSLMKGNI FGEGLGSFGG
PASVKYHSPL YSIYHFNWYG LGNTLTTTDT FYPHLFVELG VLGAILWLAF MLLYGQVSKR
RRVWLFLVGA FCFDNIFSMS FVSASYVFSA LMLMYLFSDN GSLISRPPSA AGKRAGAMR
|
|---|
| |