| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4041 |
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| Symbol | |
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| ID | 6280376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 56775 |
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| End bp | 57899 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642615144 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001887797 |
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| Protein GI | 187918766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT CCAGGTTGTT GCTGGTGGCA AGCGCTGGCG CATTGGCAAT GGGGAGCGCT
CATGCGCAAT CGAACGTTCA GCTTTACGGC TTGATGGATC TGAGCGCGGT GTCCTATCAG
ACCAATGCTA ATGCAGACGG CAAGCATGTA GTTTCTATGG GTATCAACGG CGAGCCGTGG
TTCAGCGGGA GCCGGTTCGG TATGAAAGGC GCGGAAGATC TGGGCGGCGG CCTCCGGGCG
ATCTTCAAGC TCGAAGCGGA ATATCGCGTG AGCGACGGCG CGATGGAAGA TCCCGGTCAG
CTCTTCGACC GCGATGCCTG GGTGGGCGTG GAGAGCGACA CGTTCGGCAA GTTCACGGCC
GGGTTCCAGA ACACGGTGGC GCGCGACGCC GCGGCGATTT ACGGTGACCC GTACACCAGC
GCTTCGCTGA ACACGGAAGA AGGCGGTTGG ACCAATACCA ACAACTTCAA ACAAATGATT
TTCTACGCGG GCAGTGCGAC CGGCACGCGT TACGAAAACG GCCTCGTCTG GAAGAAGCTC
TTCTACAACG GGCTTTTTGC AGCGGCCGGA TACGCGTTCG GCAACAAGAC GAGCTTTGGC
AACAACGCGA CCTACACCGG CGCGCTGGGC TATAACGGCG GTCCGTTCAA CGTGTCCGCG
TTCTACAACC ACGTGAACAA CAACGGCTTC ACCAACAAGG CGTACTCGAT TGGCGGCAAC
TACACGTACA GCATCTTTCG CGTGAACGCC GGCTATTTCC ATTACTCCGG CGATCAAGGT
GCGCTGGGCG AACGCCGTGA CAATGCGTGG ACGGTCTCTT TCAGGCTGGC GCCGAAGGGG
CCGCTCGACT ACGAAATCGG CTATCAGCAG ATGCATGCCT CGAACGCCGC ATTCGACGAC
AATGGCAGCA TCGCCAATGC CAACCTCGGC TTCAATCCGG ATACGGGAAC CGGCAGCGGC
TATAAGGAAA CGTTGTACGG CTCAGTGTTC TATCATTTTT CCAAGCGCAC GGAAGTGTAC
GTGGCCGGCG ACTACATGAA GCTGCACCGG GGCTATGTCA TCGCGTCGAC GTTTGGCGCG
AAGAACCAGT TGGAACTGAC GACGGGCATT CGCACGCGTT TCTAA
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| Protein sequence | MKKSRLLLVA SAGALAMGSA HAQSNVQLYG LMDLSAVSYQ TNANADGKHV VSMGINGEPW
FSGSRFGMKG AEDLGGGLRA IFKLEAEYRV SDGAMEDPGQ LFDRDAWVGV ESDTFGKFTA
GFQNTVARDA AAIYGDPYTS ASLNTEEGGW TNTNNFKQMI FYAGSATGTR YENGLVWKKL
FYNGLFAAAG YAFGNKTSFG NNATYTGALG YNGGPFNVSA FYNHVNNNGF TNKAYSIGGN
YTYSIFRVNA GYFHYSGDQG ALGERRDNAW TVSFRLAPKG PLDYEIGYQQ MHASNAAFDD
NGSIANANLG FNPDTGTGSG YKETLYGSVF YHFSKRTEVY VAGDYMKLHR GYVIASTFGA
KNQLELTTGI RTRF
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