Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4036 |
Symbol | |
ID | 6279942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 51162 |
End bp | 51839 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615139 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_001887792 |
Protein GI | 187918761 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC TGCTCATCGA AGACAACCCC ACGCTGGCGC ACTGGCTCGC GAAGATGCTG GAGCAGGAGG CGTTCGCGCT CGACACCGTG CAGGACGGCG ACGCCGCCGA CCAGCTGCTG CGCACCAATC ACTACGACGT GATCCTGCTC GACCTGAATC TGCCCAAGCT GTCGGGCAAG AACGTGCTGC GGCGACTGCG TCAGCGTGGC GACGCGACGC CGGTGCTGAT TCTGACGGCG AGCGGTTCGA TCGACGAAAA AGTGGAGTTG CTCGGCGCCG GCGCGGACGA TTACCTGGTC AAGCCGTTCG AAGTGCGCGA GTTGATCGCG CGGATCAAGG TGGCGATCCG CAGGCAGTCG CCCTCCAAGG CGAGTGAAGT GGTATGCGGC GATCTCACGT TCGACATCGA CACGCGGCAG TTCACGCTGA AGGGCGCGCC GCTGAACGTC ACGCCGCGCG AGCGCTCGGT ACTCGAAACG TTGATCCTGC GTCTGGGCAA AACCGTGACG AAGCCGGCGC TGGTCGACGC GATCTTCACG CTCGCCGACG AGCCGAGTGA AGACGCCGTC GAAATCTACA TTTCGCGTCT GCGCAAGAAA CTCGACGGCA GTTCGGCGGC GATCGTGACG CTGCGCGGGC TCGGTTATCT GCTGCGCAAG AAAGAAGATG ACCAATAG
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Protein sequence | MKLLLIEDNP TLAHWLAKML EQEAFALDTV QDGDAADQLL RTNHYDVILL DLNLPKLSGK NVLRRLRQRG DATPVLILTA SGSIDEKVEL LGAGADDYLV KPFEVRELIA RIKVAIRRQS PSKASEVVCG DLTFDIDTRQ FTLKGAPLNV TPRERSVLET LILRLGKTVT KPALVDAIFT LADEPSEDAV EIYISRLRKK LDGSSAAIVT LRGLGYLLRK KEDDQ
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