Gene Bphyt_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4030 
Symbol 
ID6280295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp45122 
End bp45604 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID642615133 
Productprotein of unknown function DUF847 
Protein accessionYP_001887786 
Protein GI187918755 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.788419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATT TCGAAGATGC GTTCAGAGCT CTGATTGGCA GTGAAGGCGG TTACTCCTTC 
AATCCGCACG ACCCTGGCGG TGAAACCATG TGGGGAGTCA CGGCGCGCGT GGCACGCAGC
GCGGGCTATG CCGGCGCCAT GAAAGACCTG CCGCTGGATA CCGCCAGACA GATCGCCAAA
CAGAAGTACT GGGACCCGCT GCATCTGGAC GAACTCGACC CGCGCGTTGC CTTCCAGATC
TTTGACGCCA ATTACAACGG CGGCCTGGTG GTGTTGTGGA TGCAAAAAGC TTCCGGTGCG
AAAGAAGACG GCAAGTTCGG CCCGGACACA CTCGATGCGG TGAAAAATGC GGACGCGCTG
AAGTTTGTCA TGCGCTTCGC CGCCTATCGC TTGCGTTACC TGCGCAACCT GCACGCATGG
CCCAATTTCA GCCGTGGATG GACCGAAAGA ATGGCCGCTA ATCTTCTCCT GGGAGCAGCA
TGA
 
Protein sequence
MDNFEDAFRA LIGSEGGYSF NPHDPGGETM WGVTARVARS AGYAGAMKDL PLDTARQIAK 
QKYWDPLHLD ELDPRVAFQI FDANYNGGLV VLWMQKASGA KEDGKFGPDT LDAVKNADAL
KFVMRFAAYR LRYLRNLHAW PNFSRGWTER MAANLLLGAA