| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4023 |
|---|
| Symbol | |
|---|
| ID | 6279273 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 37670 |
|---|
| End bp | 39121 |
|---|
| Gene Length | 1452 bp |
|---|
| Protein Length | 483 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642615126 |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_001887779 |
|---|
| Protein GI | 187918748 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000030517 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAG TGACTCTATT GATTGGCGGC GAAAGCCGAG GTGCAGCGGA CGGCAAGACC
TTCGAGCGGA TCAATCCCGC GAGCGGTCAG GCTGCATCGC GTGCGGCAGC GGCCACGCTG
GCCGACGCCG ACGCCGCGGT CGAAGCGGCG TCGCGGGCCT TTCCCGCCTG GTCGGCGCTG
GCGCCGACCA GGCGCCGCAA GCGGCTGCTG GCGGCAGCGG ATCTGATGGA CGCCCGCACC
GCGCAGTTCA TCGAAACCGG CGTCGCCGAA ACCGGCGCGA TGCCGAACTG GTACGGCTTC
AACGTCATGC TGGCCGCCAA CATGCTGCGC GAAGCCGCGG CCATGACCAC GCAGATCGAC
GGCGATGTGA TTCCGTCCGA CGTGCCGGGC AGTCTCGCGA TGGCGGTGCG TCAGCCATGC
GGCGTAGTGC TCGGCATGGC GCCGTGGAAC GCGCCGGTGA TCCTCGGCAC GCGGGCCATT
GCCATGCCGC TCGCGTGCGG CAACACGGTG GTGCTCAAGG CATCCGAAGG TTGTCCGGGC
GTGCATCGGT TGATCGGCAG CGTGCTGCAG GAAGCCGGTC TCGGCGACGG CGTCGTCAAC
GTGATCACGC ATTCCGCTGA AGATGCGCCG GCGATCGTCG AGCGGCTGAT CGCGCATCCG
GCGGTACGTC GCGTGAATTT CACGGGTTCG ACGCGAGTGG GGCGCATTGT CGCGCAACAT
GCGGCGTCGC ATCTGAAGCC GGCGCTGCTG GAACTCGGCG GCAAGGCGCC GGTGGTCGTG
CTCGACGACG CCGATCTGGA GGCGGCGGTT GCAGGCATCG CGTTCGGCGC GTTTTTCAAC
CAGGGGCAGA TTTGCATGTC GACGGAGCGC GTGATCGTCG ACCGGAAGAT CGCCGATGCC
TTGGTGGAAA AGCTCGCGGC AAAGGCGCGC ACTTTGAAAG CGGGCGACCC TGCCGCGGCG
GATTCCGTGC TCGGCGTGCT TGAAAGCGCA GCTGCGGCGC AACGCATCAA GGCGTTGATC
GAAGATGCGT ACGAGAAGGG CGCCAAATTG CCGGTCGGCT GTACGGCCGA AGGCGCCGCG
ATGCAGCCGG TGATCGTCGA CGGCATCACG CCTGCCATGA AGCTGTATGC GGAAGAATCG
TTCGGGCCGG TGGTCACGGT GCAGCGCGTG GACGGCGACG AAGAAGCGAT TCGAATCGCC
AACGACAGCG AGTACGGACT CTCGGCGGCG GTATTCAGCC GCGACGTGTC GCGAGCGTTG
AACGTGGCGA AGCGTATCGA ATCGGGTATC TGCCATATCA ACGGTCCGAC CGTGCACGAC
GAGGCGCAGA TGCCGTTCGG CGGTGTGAAG AAAAGCGGTT ACGGGCGATT CGGCAGTAAG
GCGTCGATTG CAGAGTTCAC GGATCTGCGT TGGATCACGA TTCAAACCGG ACCCCGGCAT
TATCCGATCT GA
|
|---|
| Protein sequence | MHEVTLLIGG ESRGAADGKT FERINPASGQ AASRAAAATL ADADAAVEAA SRAFPAWSAL
APTRRRKRLL AAADLMDART AQFIETGVAE TGAMPNWYGF NVMLAANMLR EAAAMTTQID
GDVIPSDVPG SLAMAVRQPC GVVLGMAPWN APVILGTRAI AMPLACGNTV VLKASEGCPG
VHRLIGSVLQ EAGLGDGVVN VITHSAEDAP AIVERLIAHP AVRRVNFTGS TRVGRIVAQH
AASHLKPALL ELGGKAPVVV LDDADLEAAV AGIAFGAFFN QGQICMSTER VIVDRKIADA
LVEKLAAKAR TLKAGDPAAA DSVLGVLESA AAAQRIKALI EDAYEKGAKL PVGCTAEGAA
MQPVIVDGIT PAMKLYAEES FGPVVTVQRV DGDEEAIRIA NDSEYGLSAA VFSRDVSRAL
NVAKRIESGI CHINGPTVHD EAQMPFGGVK KSGYGRFGSK ASIAEFTDLR WITIQTGPRH
YPI
|
|---|
| |