| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4019 |
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| Symbol | |
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| ID | 6279814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 33343 |
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| End bp | 34482 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642615122 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001887775 |
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| Protein GI | 187918744 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000808591 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAT CCGCACGTCT ATTACTCTGC GGCGCATTGT GCGCGGTCAG CGGCGCCGCA
GCGGCCCAAT CGAGCGTGAC GCTCTACGGC ATTATCGATA CCGGCATCGA ATACGTTTCG
CACGCGAACG CCGCGGGCAA GAGCGTGTTC CGCATGCCGT CGGTCACGGG CGAACTGCCT
TCGCGCTGGG GACTGCGCGG CAATGAAGAC CTGGGCGGAG GCTATAGCGC GGTCTTCACG
CTGGAAAGCG GCTTCAACGT GCGCGCCGGC GATCTCGGCC AGGGCGGCCG GCTGTTCGGG
CGTCAGGCGT TCGTTGGCAT CAAGAGTCCG TACGGTACGG TCTCGTTCGG CCGCCAATAC
ACGATGACGT ACCTCGCGCT GATGGGCGCG GATCTGATCG GCCCAGACAT CTACGGTCTG
GGCTCGCTCG ACGCTTACGT GCCGAATGCC CGCGCCGACA ACTCGGTGGT CTACCTCGGC
AGCTATGCGG GCGTCACGCT CGGCGCGAAC TACTCGTTCG GCCGCGACTC GGCCGGCACC
GGCAATTCGC CGGGCCAAGG CACGTGTACG GGATCGGTCG CCGGACAGGC CACTCAATGC
CGCGAATGGT CCGTCATGCT GAAGTACGAC GCGCCGCTCT TCGGCGTCGC GGCATCGTAT
GAAGAGCAGC GCGGCGGCAG CACCGCGGCG GCGAATTTCT TCGACGGCAT CGCGCCGACT
CCGCTCACCC GCGCCGCCGA CAAGGACATC CGCACGCATG TGAGCGCCTA CGCGAACCTC
GGCAAGGCCA AGCTCGGCCT GGGATGGCTC AACCGTCGCG TCGAACCGGG CGCGGACACG
ATTGCCAGCG TGCGCTCCAA TCTGTTCTTC GTGGCCGCGT CGTACAACGT GACGCCCGCT
TTCATCGTCG ACGGCGAGGT GTATCACATC ACCAATAGCG AGCACGACAC GCGCGCCACG
ATGGGCACGC TGCGCACCAC CTATCTGCTT TCGAAGCGCA CCGCTGTCTA CGCCCAAGGC
TCGTACCTTG CCAATAGCGC GAAGGCGCAC TACTCGGTCA GCGGCGGCGG CGGCGGCACG
ACGCCCACGG CAGGCACCGG CCAGACCGGC GCGATGGTCG GCATTCGTCA TTCGTTCTAG
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| Protein sequence | MQASARLLLC GALCAVSGAA AAQSSVTLYG IIDTGIEYVS HANAAGKSVF RMPSVTGELP
SRWGLRGNED LGGGYSAVFT LESGFNVRAG DLGQGGRLFG RQAFVGIKSP YGTVSFGRQY
TMTYLALMGA DLIGPDIYGL GSLDAYVPNA RADNSVVYLG SYAGVTLGAN YSFGRDSAGT
GNSPGQGTCT GSVAGQATQC REWSVMLKYD APLFGVAASY EEQRGGSTAA ANFFDGIAPT
PLTRAADKDI RTHVSAYANL GKAKLGLGWL NRRVEPGADT IASVRSNLFF VAASYNVTPA
FIVDGEVYHI TNSEHDTRAT MGTLRTTYLL SKRTAVYAQG SYLANSAKAH YSVSGGGGGT
TPTAGTGQTG AMVGIRHSF
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