Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4018 |
Symbol | |
ID | 6279445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 31599 |
End bp | 33332 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642615121 |
Product | Feruloyl esterase |
Protein accession | YP_001887774 |
Protein GI | 187918743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000882838 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGCA CCTCTATCGC GCTCGCGGCG GCTGCTACGC TCACACTCGC CGCGTGCGGC GGCAACGATC TCGGCAGCGC CGCCAACACC GGCGCCAATT CATCCGCCTT GCCGCAACTG AGTGCGGCCA CGCCCGGCAC GCTGGCGGGC AATTGCGCGG CACTCGCTGC GAAGCTCTCA TTCGCCAACA CCGTCTTCAC CACGGTGACG GACGTCGCGG CAGGCACGCT GAAAGTCGCC GGAAAATCCA TCGCCGAACA TTGCCTGATT CAAGGCAGCA TGAATCAGCG GGTCAGCAGC GTGGACGGCA AGACCTACGC GATCGGCTTC GAAATGCGCC TGCCGATTGC ATGGAATGGG CGTTTCTTCT ATCAGCCCAA CGGCGGACTC GACGGCAATG TGGTCACGGC CACCGGCGAG ATCGGCGGCG GCGGTCCCAC CAGCGACGCG CTCAACATGG GCTTCGCGGT CATCAGCTCG GACGCGGGGC ACAGCTCGGC GCAAAATCCC CTGTTCGGTC TCGATCCGCA GGCACGGATC GACTACGGCT ACAACGCAGT CGCCACGCTC ACGCCGATGG CCAAGCAGGT CATCAAGCTC GCGTACGGCA AGGCGCCGGA TCGCAGCTAC TTCGACGGCT GCTCCAACGG TGGACGTCAT GCGCTGGTCG CGGCGGCACG CTCATCGGCG GAGTATGACG GCATCATTGC GGGCGACCCG GGCTTTCATC TGCCGAAGGC GGCCGTCGGC GAAATGTGGA GCGCGCAGCA GCTCGCGAAA GTGGCGACCG CGACGACCTC GAACGGCCTG CCCGATATCA CGACCGGCTT CACCGCGACG GAACGTCAAA TGGTGGCGTC GAAAATACTG TCAAAGTGCG ATGCACTCGA CGGTGCGACA GACGGCCTCA TTCAGGATAT CAAGGCATGC CAGGCAAACT TCAGCCTTGC TACCGACGTG CCGACCTGCA CGAACAACGT CCGCGACGGC ACGTGTCTGA CGAGCGCGCA GAAAGACGCC GTCGGCAATG TGTTCTCCGG CGCGCGCAAC AGCGCGGGCA CGGCCCTCTA TGCAAGCTTC CCCTACGACG CCGGACTCGG CCCGGGCTGG TCCGCATGGA AGCAGGCCAA CTCGATCACG CTCGACCCGG CCGCCGCTGC CTTCACGTTC ACCACGCCGC CGCAAACCGC TGCCGTGCTG AGCCAGTTGT CCGCGTACGC GCTGAACTTC AGCATGGACA CCGACGCGCC GAAGATCTTC GCGACCAGCG GCGCGTACAG CGAGTCTGCC TGGTCATTCA TGACGCCGCC CGACGAAACC AATCTGAGCG CGTTGAAGCA GCGCGGGGCA AAGCTGATGG TCTATCACGG CACGAGCGAC CCGGTGTTTT CATCGAACGA CACGACCGAC TGGTATCAGC GGCTCACGGC AGCCAATAGC GGCGACGCGT CGAACTTCGC GCGCCTTTAC ACGATTGCCG GCATGAACCA CTGCAGCGGC GGGCCGAGCA CCGACCAGTT CGACATGCTC ACGCCGCTCG TCGCATGGGT CGAACAGGGC AAGGCGCCGG ACAGCGTGGT CGCCACTGCG CGCGACGCGA GCAATGTCAC ACCGAACTCC GACGTGCCCA CAGGCTGGGG CGCGGGACGC ACGCGGCCGC TTTGCCCGTA TCCGAAGGTG GCGCGCTATC AGGGCGGCGA CGTCAGCGCC GCGAGTAGTT TCGCTTGTAG CTGA
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Protein sequence | MKCTSIALAA AATLTLAACG GNDLGSAANT GANSSALPQL SAATPGTLAG NCAALAAKLS FANTVFTTVT DVAAGTLKVA GKSIAEHCLI QGSMNQRVSS VDGKTYAIGF EMRLPIAWNG RFFYQPNGGL DGNVVTATGE IGGGGPTSDA LNMGFAVISS DAGHSSAQNP LFGLDPQARI DYGYNAVATL TPMAKQVIKL AYGKAPDRSY FDGCSNGGRH ALVAAARSSA EYDGIIAGDP GFHLPKAAVG EMWSAQQLAK VATATTSNGL PDITTGFTAT ERQMVASKIL SKCDALDGAT DGLIQDIKAC QANFSLATDV PTCTNNVRDG TCLTSAQKDA VGNVFSGARN SAGTALYASF PYDAGLGPGW SAWKQANSIT LDPAAAAFTF TTPPQTAAVL SQLSAYALNF SMDTDAPKIF ATSGAYSESA WSFMTPPDET NLSALKQRGA KLMVYHGTSD PVFSSNDTTD WYQRLTAANS GDASNFARLY TIAGMNHCSG GPSTDQFDML TPLVAWVEQG KAPDSVVATA RDASNVTPNS DVPTGWGAGR TRPLCPYPKV ARYQGGDVSA ASSFACS
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