Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4001 |
Symbol | |
ID | 6277902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 13731 |
End bp | 14483 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642615104 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_001887757 |
Protein GI | 187918726 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCGA TAGTGCGAAT CGATGACGAA GTCGTGGACG TGGCCGAGTT CATTCGTCTT CTGAAACTGA CCGGCCAGTT CGAGAGCCTG ATCGAACAGA TTGTGCGCGA CAAGCTCACG GTTCACGCGG CGAAGAAGCA GGGCATTACC GTCACCGCCG ATGAAATCCA GCAACGCGCC GATCAGTTCC GCCGCGTGCG CGGCCTGCAT CGCGCGACGG ATATGAATCA GTATCTCGAT GCGCTCAATG TCAGTCTCGA CGAGTTCGAA GCCTTCATTA CCGACGGGCT GTATCAGGAG AAGATGCTCG ACGAGATCGG CAACGAGGCC GCGATCAAGG ATTACTTCGC GCTGAATTCG CCGAAGTTCG ACGCCATAGA AGTGAGCCAT ATCGTGCTGG ACAGCGAGGG CAAGGCGAAG GAGATGATCT CGTACCTGCA CGACGATCCC GACAGTTTCG CCGACATGGC GCGCGAGCAT TCCATCGCCG ATACGCGCGA GGCAGGCGGC GTAATCGGCA AGGTGCTGCG CGGCTCGTTG AAACCGGATA TCGAAGCGAA GATTTTCAAC GCGGCGGTGG GCGATCTGCT GGGACCGTTT CCGTCGGCGG ACCGCTCGTG CTTCGAGATT TTCGCCGTGA CGGCCAAATA TCCCGCGACG CTCGACGCCG ACGTGGCGTC CGAAGTCCGG CGCCTGCTTC GCGAAGGCTG GTTGATCTCA CGCGCCCAGG AGCACGTGAT CGAAGCGCGC TAA
|
Protein sequence | MTAIVRIDDE VVDVAEFIRL LKLTGQFESL IEQIVRDKLT VHAAKKQGIT VTADEIQQRA DQFRRVRGLH RATDMNQYLD ALNVSLDEFE AFITDGLYQE KMLDEIGNEA AIKDYFALNS PKFDAIEVSH IVLDSEGKAK EMISYLHDDP DSFADMAREH SIADTREAGG VIGKVLRGSL KPDIEAKIFN AAVGDLLGPF PSADRSCFEI FAVTAKYPAT LDADVASEVR RLLREGWLIS RAQEHVIEAR
|
| |