| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3998 |
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| Symbol | |
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| ID | 6278280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 8076 |
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| End bp | 9530 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642615101 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001887754 |
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| Protein GI | 187918723 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGCGT TGCTTTCATC AGCTCGTCAG CGCTTTTTCC GCGGCACATC CGCACTGCGC
TGCGTTTGCG CGGCGACGGT ATGCGCGCTC TCGCTGTCGG CCTGTATCGA TGTCAGCATG
CCGGACTACA AGCGTCCCGA CACGCCCGCC AAAGCCTCGT GGTCGGATCA GAAAGGCTCG
CCCGTCTCGG CCGCCGCGAC GATCGAACCC GACTGGTGGA AAGGCTTCCA GGATCCCTAT
CTCGACACGC TGATCGCAAA GGCGATTGCC GGCAACTTCG ATATCAAGGT GCTGGCCGCG
CGTATCGACG TGGCCGGCAC GCAGATCGGC GAAGCCAAAG CCGGCGCTTT GCCGACCATG
GATCTCGGCG CCGGCGCCGA TTTCGAAAAG ACCACGCATC AGACCTTCTC CAGGCAGTAC
AACCTCGCGA CGCAGGTGAA CTGGGACATC GATATCTGGG GCAAAGTCGA AAAAGGCGTG
CAGGCGCAGA AGGCGGAATT TCACGCGAGC GAGGCCGACT GGCGAGCCGG GTATCTCGAA
CTGGTGTCGA ACGTATCCAG CACCTACTTC CAGATTCTGC AATTCGACGA CCAGATCGAA
CAGCAACAGA AAACGCTCGA AACAAACCGG CAGATTCTCG CGATTTACGA CGGTCAGCGC
CGCAACGGAC TTATCCCGCA GACTCAGGTG TTGCGCCAGC AGGCGGAGAT CAACCGCCTG
ACCAATCAGT TGCTCGACCT GCGCCGTTCG CGCGCGCTGG CCAACAACGC GCTGTGCACG
CTGATCGGCG TGCCGGCCGG CGAATTCCAG ATGCCCAAGG GGCATTTGCA GCAGCGCGTG
CAACTGCCGC CGGTGCCGGA CGGCTTGCCC GCGCAACTGC TCGCACGCCG TCCCGACGTG
GTGGCCGCCG AGTTCAGAGT GCTGGAAGCG TACGACCTCG TCGGCCAGGC CAAGCTTGCG
CAACTGCCGA CCATCAGCCT GACCGGGCAC GGCGGCACTG CGAGTTTCGC GTTGACCGAT
CTGCTGAAAT CGTTCACGTA CGGCTTCATG CCTAGCATCA ACATTCCGCT GCTCGATCCC
GGCGTGCGGG CGCATGTGAA AGTCACGCAA GCGCAATCGA CAGTGGCCGA ACAGCAGTAT
CGCGTGGCGG TAATGGGCGC GTTCGAGGAA GTGGAAAACG CGCTGGTCAA CGTAAATTCG
CACAAGGAAC AGCGCGTGGA GTTGCAGCAG GAGGTATCGC GGCTGCAGAT CGTGGCGGAC
CAGATTCAGT CGCAACTGCG CCTCGGCGTG GTGTCGCAGC TGGAGGTATT CGAAACCGAA
CGGACCTTGC TGGAGGCGCA GCAGGGACTG CTCGCCAACC ATCAACAGAT TCTGTCCGAC
ACGGTGTTGC TTTATAAAGC GCTGGGCGGC GGCTGGCCGA GCGGGGACGT GCAGGCACAA
GTAAAGGAAC ACTGA
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| Protein sequence | MSALLSSARQ RFFRGTSALR CVCAATVCAL SLSACIDVSM PDYKRPDTPA KASWSDQKGS
PVSAAATIEP DWWKGFQDPY LDTLIAKAIA GNFDIKVLAA RIDVAGTQIG EAKAGALPTM
DLGAGADFEK TTHQTFSRQY NLATQVNWDI DIWGKVEKGV QAQKAEFHAS EADWRAGYLE
LVSNVSSTYF QILQFDDQIE QQQKTLETNR QILAIYDGQR RNGLIPQTQV LRQQAEINRL
TNQLLDLRRS RALANNALCT LIGVPAGEFQ MPKGHLQQRV QLPPVPDGLP AQLLARRPDV
VAAEFRVLEA YDLVGQAKLA QLPTISLTGH GGTASFALTD LLKSFTYGFM PSINIPLLDP
GVRAHVKVTQ AQSTVAEQQY RVAVMGAFEE VENALVNVNS HKEQRVELQQ EVSRLQIVAD
QIQSQLRLGV VSQLEVFETE RTLLEAQQGL LANHQQILSD TVLLYKALGG GWPSGDVQAQ
VKEH
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