| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0311 |
|---|
| Symbol | |
|---|
| ID | 6273393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010660 |
|---|
| Strand | + |
|---|
| Start bp | 208301 |
|---|
| End bp | 209281 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641728922 |
|---|
| Product | outer membrane protease |
|---|
| Protein accession | YP_001883312 |
|---|
| Protein GI | 187734391 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4571] Outer membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 131 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATTT CAACCAAAAA AGTAGAGTTC TCGATGAAAT TAAAATTCCT TGTACTTGCA
CTTTGTGTAC CTGCGATCTT TACTACACAT GCTACCACTA ACTATCCACT TTTCATACCG
GATAACATCA GTACGGATAT TAGTCTAGGA TCTCTGAGTG GCAAAACAAA AGAACGCGTT
TATCATCCCA AGGAAGGGGG GAGAAAAATT AGTCAACTGG ACTGGAAATA CAGTAATGCG
ACTATTGTTA GAGGTGGCAT CGATTGGAAG CTAATTCCAA AAGTGTCTTT CGGAGTTTCC
GGTTGGACTA CTTTAGGTAA CCAGAAAGCA AGCATGGTTG ATAAAGACTG GAACAATTCC
AATACCCCTC AGGTATGGAC CGACCAGAGC TGGCATCCCA ATACGCATCT CCGTGATGCT
AACGAATTCG AGCTGAATCT TAAAGGTTGG TTATTAAATA ATTTGGATTA TCGACTTGGA
CTAATAGCAG GTTACCAAGA GAGTCGTTAC AGTTTTAATG CAATGGGAGG GAGTTATATT
TATAGTGAAA ACGGGGGGAA CAGGAATAAA AAAGGGGCAC ATCCTAGTGG TGAAAGAACA
ATAGGTTACA AACAGCTCTT CAAAATACCT TATATTGGAT TAACTGCTAA TTACCGCCAT
GAGAATTTTG AGTTTGGAGC AGAACTGAAA TATAGTGGTT GGGTTCGTTC ATCTGATACA
GATAAACACT ATCAGACTGA GACAATTTTT AAAGATGAAA TAAAAAACCA AAATTACTGC
TCTGTTGCTG CGAATATTGG ATACTATGTC ACCCCCAGTG CAAAATTTTA TATAGAAGGC
TCCAGAAATT ACATTTCTAA TAAAAAAGGT GATACATCTC TTTATGAGCA AAGTACCAAT
ATATCTGGCA CCATTAAAAA TAGTGCAAGT ATTGAATATA TTGGTTTTCT CACTTCCGCA
GGTATAAAGT ATATTTTTTG A
|
|---|
| Protein sequence | MDISTKKVEF SMKLKFLVLA LCVPAIFTTH ATTNYPLFIP DNISTDISLG SLSGKTKERV
YHPKEGGRKI SQLDWKYSNA TIVRGGIDWK LIPKVSFGVS GWTTLGNQKA SMVDKDWNNS
NTPQVWTDQS WHPNTHLRDA NEFELNLKGW LLNNLDYRLG LIAGYQESRY SFNAMGGSYI
YSENGGNRNK KGAHPSGERT IGYKQLFKIP YIGLTANYRH ENFEFGAELK YSGWVRSSDT
DKHYQTETIF KDEIKNQNYC SVAANIGYYV TPSAKFYIEG SRNYISNKKG DTSLYEQSTN
ISGTIKNSAS IEYIGFLTSA GIKYIF
|
|---|
| |