Gene SbBS512_A0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0260 
Symbol 
ID6273483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp174376 
End bp175197 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content40% 
IMG OID641728881 
Productpolysaccharide deacetylase family protein 
Protein accessionYP_001883272 
Protein GI187734389 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones150 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAAAG CCAATCATGT TCCGGTATTA ATGTATCATC ATGTCAGTCA TTGCCCCGGA 
CTGGTTACAC TTTCTCCCGT GACATTCCGG AAGCAAATGA AATGGTTGGC TGAAAACAAC
TGGAAAACAC TGTCATCAGA TGAACTGGAG TTTTTTTATC GGGGCGGAAA ACTCCCCCGG
AAAAGCGTTA TGTTGACATT TGATGATGGA TACCTTGACA ACTGGTTTCA GGTATATCCT
TTATTGAAAG AGTTTAATCT CAAAGCACAT ATTTTTTTAA TTACCGGTTT TATTGGGAAT
GGTCCGGTTC GTCACTCTCC TGGAAAGGAA TATTCTCATC GCGATTGCGA ACATCAAATA
GCGACAGGGA ATGCTGATAA TGTTATGCTT CGCTGGTCTG AAGTAAACGA AATGTTGCAA
TCTGGTCTGG TCGAATTTCA TGTTCATACG CATACTCATA CACGCTGGGA TAAAAAGTTC
AGTTCACGAG AAGAACAGTG TAAACATCTT CGGCAGGACT TGTTGAGCGG GAGAGAATAT
TTGAAAGAAA TGACAGGAAA ATGCAGTAAA CATTTGTGTT GGCCGGAAGG TTATTATAAC
AAGGATTATA TTCAGGTCGC TGAAGAACTT GGATTCTATT ATTTATATAC AACAGAAAGA
AGAATGAATG CTCCTGCTAA AGGAACTACA CGGATAGGAA GAATAAGCAC CAAAGAACGG
GAAAGTTGCG CATGGCTGAA AAGACGACTT TTTTATTATA CAACACCGTT TTTTTCATCG
TTGCTGGCCT TTCATAAGGG GCCAAGATTA CCGGATGATT AA
 
Protein sequence
MFKANHVPVL MYHHVSHCPG LVTLSPVTFR KQMKWLAENN WKTLSSDELE FFYRGGKLPR 
KSVMLTFDDG YLDNWFQVYP LLKEFNLKAH IFLITGFIGN GPVRHSPGKE YSHRDCEHQI
ATGNADNVML RWSEVNEMLQ SGLVEFHVHT HTHTRWDKKF SSREEQCKHL RQDLLSGREY
LKEMTGKCSK HLCWPEGYYN KDYIQVAEEL GFYYLYTTER RMNAPAKGTT RIGRISTKER
ESCAWLKRRL FYYTTPFFSS LLAFHKGPRL PDD