Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0260 |
Symbol | |
ID | 6273483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | + |
Start bp | 174376 |
End bp | 175197 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641728881 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_001883272 |
Protein GI | 187734389 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 150 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAAAG CCAATCATGT TCCGGTATTA ATGTATCATC ATGTCAGTCA TTGCCCCGGA CTGGTTACAC TTTCTCCCGT GACATTCCGG AAGCAAATGA AATGGTTGGC TGAAAACAAC TGGAAAACAC TGTCATCAGA TGAACTGGAG TTTTTTTATC GGGGCGGAAA ACTCCCCCGG AAAAGCGTTA TGTTGACATT TGATGATGGA TACCTTGACA ACTGGTTTCA GGTATATCCT TTATTGAAAG AGTTTAATCT CAAAGCACAT ATTTTTTTAA TTACCGGTTT TATTGGGAAT GGTCCGGTTC GTCACTCTCC TGGAAAGGAA TATTCTCATC GCGATTGCGA ACATCAAATA GCGACAGGGA ATGCTGATAA TGTTATGCTT CGCTGGTCTG AAGTAAACGA AATGTTGCAA TCTGGTCTGG TCGAATTTCA TGTTCATACG CATACTCATA CACGCTGGGA TAAAAAGTTC AGTTCACGAG AAGAACAGTG TAAACATCTT CGGCAGGACT TGTTGAGCGG GAGAGAATAT TTGAAAGAAA TGACAGGAAA ATGCAGTAAA CATTTGTGTT GGCCGGAAGG TTATTATAAC AAGGATTATA TTCAGGTCGC TGAAGAACTT GGATTCTATT ATTTATATAC AACAGAAAGA AGAATGAATG CTCCTGCTAA AGGAACTACA CGGATAGGAA GAATAAGCAC CAAAGAACGG GAAAGTTGCG CATGGCTGAA AAGACGACTT TTTTATTATA CAACACCGTT TTTTTCATCG TTGCTGGCCT TTCATAAGGG GCCAAGATTA CCGGATGATT AA
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Protein sequence | MFKANHVPVL MYHHVSHCPG LVTLSPVTFR KQMKWLAENN WKTLSSDELE FFYRGGKLPR KSVMLTFDDG YLDNWFQVYP LLKEFNLKAH IFLITGFIGN GPVRHSPGKE YSHRDCEHQI ATGNADNVML RWSEVNEMLQ SGLVEFHVHT HTHTRWDKKF SSREEQCKHL RQDLLSGREY LKEMTGKCSK HLCWPEGYYN KDYIQVAEEL GFYYLYTTER RMNAPAKGTT RIGRISTKER ESCAWLKRRL FYYTTPFFSS LLAFHKGPRL PDD
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