| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0251 |
|---|
| Symbol | ccdA2 |
|---|
| ID | 6273434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010660 |
|---|
| Strand | + |
|---|
| Start bp | 169187 |
|---|
| End bp | 169405 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641728873 |
|---|
| Product | plasmid maintenance protein CcdA |
|---|
| Protein accession | YP_001883264 |
|---|
| Protein GI | 187734356 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5302] Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 140 |
|---|
| Plasmid unclonability p-value | 0.704667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC GTATTACTGT CACTATAGAC AGTGACAGCT ATCAGTTACT TAAATCCGCA
AACGTGAATA TCTCAGGCCT GGTAAATACG GCCATGCAAA AAGAGGCCCG CCGTCTGCGT
GCGGAACGCT GGCAGGCTGA AAATCAGCAG GGGATGGCTG AGATCGCCCG TTTTATTGAA
ATGAACGGCT CTTTTGCCGA TGAGAACAGG GACTGGTGA
|
|---|
| Protein sequence | MKQRITVTID SDSYQLLKSA NVNISGLVNT AMQKEARRLR AERWQAENQQ GMAEIARFIE
MNGSFADENR DW
|
|---|
| |