Gene SbBS512_A0245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0245 
Symbol 
ID6273356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand+ 
Start bp166286 
End bp166981 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content56% 
IMG OID641728867 
ProductRNA-directed DNA polymerase 
Protein accessionYP_001883258 
Protein GI187734485 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones143 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGACC GTAATGGGTC CGGAGCAAAG GGCTTGCCCC ATTGTGCTGA TGGTGCGGCG 
GCAACCACGG GCGACAATGC CGATGGGAGG ACTGCTGTAA AATCGGCAAA GCCATTTCCT 
GTAAGTAAAC GACAGGTATG GGAAGCTTAT AAACGAGTAA AAGCCAACCG TGGGGCGGCA 
GGCATTGACG GGCAGACACT GGCCGGGTTT GACGAGAATG TTACAGACAA TCTCTACAAA 
CTGTGGAACA GAATGGCTTC CGGCAGTTAT ATGCCGCAGG CGGTAAGGCG TGTGGACATT 
CCCAAAGCTG ACGGTGGTGT ACGTCCGCTC GGTATTCCGG CCGTGTCGGA CCGGATCGCC 
CAGATGGTCG TTAAGCAGAT ACTCGAGCCG GTACTGGAAC CCCTGTTCCA TGCAGACTCG 
TATGGTTATC GACCGGGTAA ATCCGCACAC CAGGCGATTG CGCAGGCGAG GAAACGCTGC 
TGGAAGTTTG ACTGGGTGGT GGAAGTCGAT ATTAAAGGCT TCTTTGATGA TATCGATCAT 
GACCTGCTAC TGAAGACAGT GCAGCATCAT ACTCAGGCAC GCTGGGTGGT GATGTACATT 
GAGCGCAGGC TGAAGGCACC GGTGCAAATG CCGGATGGAG CAATGCTGGC ACGGGGTCGA 
GGAACGCCGC AGGGCGGCGT AATCTCCCCC CTGTGA
 
Protein sequence
MKDRNGSGAK GLPHCADGAA ATTGDNADGR TAVKSAKPFP VSKRQVWEAY KRVKANRGAA 
GIDGQTLAGF DENVTDNLYK LWNRMASGSY MPQAVRRVDI PKADGGVRPL GIPAVSDRIA 
QMVVKQILEP VLEPLFHADS YGYRPGKSAH QAIAQARKRC WKFDWVVEVD IKGFFDDIDH 
DLLLKTVQHH TQARWVVMYI ERRLKAPVQM PDGAMLARGR GTPQGGVISP L