| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0217 |
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| Symbol | |
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| ID | 6273338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 145918 |
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| End bp | 149226 |
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| Gene Length | 3309 bp |
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| Protein Length | 1102 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641728846 |
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| Product | outer membrane protein IcsA |
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| Protein accession | YP_001883237 |
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| Protein GI | 187734495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 91 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAA TTCACAAATT TTTTTGTAAT ATGACCCAAT GTTCACAGGG GGGGGCCGGA
GAATTACCTA CGGTAAAGGA AAAAACATGC AAATTGTCTT TTTCTCCTTT TGTTGTTGGT
GCATCCCTGT TGCTCGGGGG GCCAATAGCT TTTGCTATTC CTCTTTCGGG TACTCAAGAA
CTTCATTTTT CAGAGGACAA TTATGAAAAA TTATTAACAC CTGTTGATGG ACTTTCTCCC
TTGGGAGCTG GTGAAGATGG AATGGATGCG TGGTATATAA CTTCTTCCAA CCCCTCTCAT
GCATCTAGAA CTAAGCTACG GATTAACTCT GATATTATGA TTAGCGCAGG TCATGGTGGT
GCTGGTGATA ATAATGATGG TAATAGTTGT GGCGGTAATG GTGGTGACTC TATTACCGGA
TCTGACTTGT CTATAATCAA TCAAGGCATG ATTCTTGGTG GTAGCGGCGG TAGCGGTGCT
GACCATAACG GTGATGGTGG TGAGGCTGTT ACAGGAGACA ATCTGTTTAT AATAAATGGA
GAAATTATTT CAGGTGGACA TGGTGGCGAT AGTTATAGTG ATAGTGATGG GGGGAATGGA
GGTGATGCCG TCACAGGAGT CAATCTACCC ATAATCAACA AAGGGACTAT TTCCGGTGGT
AATGGAGGTA ACAATTATGG TGAGGGTGAT GGCGGTAATG GAGGTGATGC CATCACAGGA
AGCAGCCTCT CTGTAATCAA TAAGGGCACG TTCGCTGGAG GCAACGGAGG TGCTGCTTAC
GGTTATGGTT ATGATGGCTA CGGTGGTAAT GCTATCACAG GAGATAACCT GTCTATAATC
AACAATGGAG CTATTTTAGG CGGTAATGGT GGACATTGGG GGGATGCTAT AAATGGTAGC
AATATGACCA TTGCTAATAG CGGATATATA ATTTCAGGTA AAGAAGATGA TGGAACACAA
AATGTAGCAG GTAATGCTAT CCACATCACT GGTGGAAACA ATTCATTAAT ACTCCATGAA
GGTTCTGTCA TTACTGGTGA TGTACAGGTT AACAATTCAT CCATTCTGAA AATTATCAAC
AATGATTACA CTGGGACCAC ACCAACTATT GAAGGTGATT TATGTGCTGG TGATTGTACA
ACTGTTTCAC TATCAGGTAA CAAATTCACT GTTTCAGGTG ACGTTTCTTT TGGTGAGAAC
AGTTCTTTAA ATTTAGCTGG AATCAGTAGT CTGGAAGCTT CTGGAAATAT GTCATTTGGC
AACAATGTAA AAGTGGAAGC TATTATAAAT AACTGGGCGC AGAAGGACTA TAAACTGCTA
AGTGCAGATA AAGGGATAAC AGGTTTCAGT GTTTCTAATA TATCTATCAT CAATCCGTTA
CTCACTACTG GTGCTATTGA CTATACAAAA AGCTATATCA GTGACCAGAA TAAATTGATC
TACGGTTTGA GCTGGAATGA TACAGATGGC GACAGTCATG GAGAGTTCAA TCTGAAAGAA
AACGCTGAAC TTACTGTTAG TACTATTCTG GCAGATAATC TCAGCCATCA TAATATAAAT
GGCTGGGACG GAAAATCCCT AACAAAATCA GGGGAGGGAA CTCTCATTTT GGCGGAAAAA
AATACCTACT CTGGTCTCAC CAACATCAAT GCAGGCATTC TAAAAATGGG GACAGTTGAA
GCTATGACAC GTACCGCTGG TGTTATTGTT AATAAAGGTG CTACCTTGAA TTTTTCAGGC
ATGAACCAAA CTGTTAACAC TTTATTAAAT AGTGGGACTG TGCTAATCAA TAATATTAAT
GCCCCTTTTT TGCCTGACCC CGTCATTGTC ACAGGTAACA TGACTCTGGA GAAAAACGGT
CATGTTATTC TCAATAATAG TTCGTCAAAT GTCGGTCAGA CCTATGTTCA GAAAGGTAAT
TGGCATGGAA AGGGCGGAAT ATTATCTTTG GGCGCGGTTC TCGGCAATGA CAACAGTAAA
ACTGACCGGC TGGAAATTAC AGGCCATGCG TCTGGTATTA CCTATGTTGC AGTGACAAAT
GAGGGAGGCT CTGGAGATAA AACTCTTGAA GGTGTTCAAA TTATTTCGAC AGATTCTTCT
GATAAGAATG CTTTTATTCA GAAAGGCCGT ATTGTTGCTG GTAGTTATGA CTATCGCCTG
AAACAGGGCA CTGTATCTGG ACTGAATACC AATAAGTGGT ATCTAACTAG TCAGATGGAT
AATCAAGAAT CAAAACAGAT GAGCAATCAA GAGTCTACTC AAATGAGTAG TCGCCGAGCT
AGTTCACAGC TTGTATCTTC ACTTAATTTG GGTGAAGGTA GTATTCACAC ATGGCGCCCT
GAAGCTGGCA GTTATATTGC TAACCTGATA GCAATGAACA CGATGTTTAG TCCTTCTCTC
TATGACCGAC ACGGTAGCAC TATTGTTGAT CCTACTACAG GTCAGCTCAG CGAAACCACC
ATGTGGATTC GTACTGTTGG TGGACATAAT GAGCATAATT TAGCTGATAG ACAATTAAAA
ACCACAGCTA ACAGGATGGT TTATCAGATT GGTGGAGATA TTTTGAAGAC AAACTTCACT
GATCATGATG GCTTGCATGT GGGTATTATG GGAGCTTATG GATATCAGGA TAGCAAAACT
CATAATAAGT ATACTAGTTA TAGTTCACGA GGAACTGTGA GCGGTTATAC TGCCGGTTTG
TACAGTTCTT GGTTTCAGGA TGAAAAAGAA CGAACAGGTC TATATATGGA TGCTTGGTTG
CAGTACGGTT GGTTTAATAA TACAGTCAAA GGAGATGGGG TAACTGGTGA GAAATATTCC
AGCAAAGGAA TAACAGGAGC TTTGGAAGCT GGCTATATCT ACCCAACTAT ACGCTGGACT
ACTCATAATA ATATTGACAA CGCATTGTAT CTCAATCCAC AAGTCCAGAT AACTAGGCAT
GGGGTAAAAG CAAACGACTA TATTGAACAC AATGGCACTA TGGTCACATC CTCTGGGGGC
AATAATATTC AAGCAAAATT GGGATTGCGT ACATCCTTAA TTAGTCAGAG TTGTATCGAT
AAGGAGACTC TTCGTAAGTT CGAACCATTT TTGGAAGTGA ATTGGAAATG GAGCTCAAAG
CAATATGGTG TAATTATGAA TGGCATGTCA AATCACCAGA TAGGCAACCG TAATGTGATT
GAACTCAAAA CTGGTGTGGG GGGGCGTCTT GCAGATAACC TAAGCATCTG GGGAAACGTA
TCTCAGCAAT TGGGTAATAA CAGTTACAGA GACACCCAAG GTATTTTGGG TGTGAAATAT
ACCTTCTGA
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| Protein sequence | MNQIHKFFCN MTQCSQGGAG ELPTVKEKTC KLSFSPFVVG ASLLLGGPIA FAIPLSGTQE
LHFSEDNYEK LLTPVDGLSP LGAGEDGMDA WYITSSNPSH ASRTKLRINS DIMISAGHGG
AGDNNDGNSC GGNGGDSITG SDLSIINQGM ILGGSGGSGA DHNGDGGEAV TGDNLFIING
EIISGGHGGD SYSDSDGGNG GDAVTGVNLP IINKGTISGG NGGNNYGEGD GGNGGDAITG
SSLSVINKGT FAGGNGGAAY GYGYDGYGGN AITGDNLSII NNGAILGGNG GHWGDAINGS
NMTIANSGYI ISGKEDDGTQ NVAGNAIHIT GGNNSLILHE GSVITGDVQV NNSSILKIIN
NDYTGTTPTI EGDLCAGDCT TVSLSGNKFT VSGDVSFGEN SSLNLAGISS LEASGNMSFG
NNVKVEAIIN NWAQKDYKLL SADKGITGFS VSNISIINPL LTTGAIDYTK SYISDQNKLI
YGLSWNDTDG DSHGEFNLKE NAELTVSTIL ADNLSHHNIN GWDGKSLTKS GEGTLILAEK
NTYSGLTNIN AGILKMGTVE AMTRTAGVIV NKGATLNFSG MNQTVNTLLN SGTVLINNIN
APFLPDPVIV TGNMTLEKNG HVILNNSSSN VGQTYVQKGN WHGKGGILSL GAVLGNDNSK
TDRLEITGHA SGITYVAVTN EGGSGDKTLE GVQIISTDSS DKNAFIQKGR IVAGSYDYRL
KQGTVSGLNT NKWYLTSQMD NQESKQMSNQ ESTQMSSRRA SSQLVSSLNL GEGSIHTWRP
EAGSYIANLI AMNTMFSPSL YDRHGSTIVD PTTGQLSETT MWIRTVGGHN EHNLADRQLK
TTANRMVYQI GGDILKTNFT DHDGLHVGIM GAYGYQDSKT HNKYTSYSSR GTVSGYTAGL
YSSWFQDEKE RTGLYMDAWL QYGWFNNTVK GDGVTGEKYS SKGITGALEA GYIYPTIRWT
THNNIDNALY LNPQVQITRH GVKANDYIEH NGTMVTSSGG NNIQAKLGLR TSLISQSCID
KETLRKFEPF LEVNWKWSSK QYGVIMNGMS NHQIGNRNVI ELKTGVGGRL ADNLSIWGNV
SQQLGNNSYR DTQGILGVKY TF
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