Gene SbBS512_A0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0208 
Symbol 
ID6273515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp139709 
End bp140599 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content54% 
IMG OID641728843 
ProductIS629 transposase orfB 
Protein accessionYP_001883234 
Protein GI187734395 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones173 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCAC TGCTGGATAA GCTGCGTGAG CAGTACGGGG TCGGACCGCT ATGCAGCGAA 
CTGCATATTG CCCCGTCAAC GTATTACCAC TGTCAGCAAC AGCGACATCA TCCGGATAAA
CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACAGCG CGTATACGAT
GAAAATCACA AGGTATACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGCATC
AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC
CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA
AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC
AGCACATGGC AGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC
GTGGGGTGGC GGGTCTCATC GTCCATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG
GCGTTATGGG CCCGTCGACC GTCCGGCACG GTCCATCACA GTGATAAAGG TTCTCAGTAT
GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TACTGGCATC AACAGGAAGT
ACAGGCGACT CGTATGACAA CGCGATGGCG GAGAGCATCA ATGGTCTTTA CAAAGCGGAG
GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTCACGTGG
GGGGACTGGT ATAACAATCG ACGATTGCTG GAAAGGCTGG GCCATACTCC TCCGGCAGAA
GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
 
Protein sequence
MMPLLDKLRE QYGVGPLCSE LHIAPSTYYH CQQQRHHPDK RSARAQRDDW LKKEIQRVYD 
ENHKVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV
NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ
ALWARRPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAMA ESINGLYKAE
VIHRKSWKNR AEVELATLTW GDWYNNRRLL ERLGHTPPAE AEKAYYASIG NDDLAA