| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0205 |
|---|
| Symbol | |
|---|
| ID | 6273380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010660 |
|---|
| Strand | + |
|---|
| Start bp | 138101 |
|---|
| End bp | 138604 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641728840 |
|---|
| Product | IS1 transposase orfB |
|---|
| Protein accession | YP_001883231 |
|---|
| Protein GI | 187734492 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 169 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCC AGTGCACGCA TTATGGGCGT TGGCCTCAAC ACGATTTTAC GTCACTTAAA
AAACTCAGGC CGCAGTCGGT AACCTCGCGC ATACAACCGG GCAGTGATGT GATTGTCTGC
GCTGAAATGG ACGAACAGTG GGGCTACGTC GGTGCTAAAT CACGTCAGCG CTGGCTGTTT
TACGCGTATG ACAGGATACG GAGGACGGTT GTGGCGCACG TCTTCGGTGA ACGCACTCTG
GCCACACTGG AGCGTCTTCT GAGCCTGCTG TCGGCCTTTG AGGTCGTGGT ATGGATGACG
GATGGCTGGC CGCTGTATGA ATCACGCCTG AAGGGAAAGC TGCACGTTAT CAGCAAGCGT
TACACTCAGC GCATTGAGCG ACATAATCTG AATCTGAGAC AACATCTGGC AAGGCTGGGA
CGGAAGTCAC TGTCGTTCTC AAAATCGGTG GAGCTGCATG ACAAGGTCAT CGGGCATTAT
CTGAACATAA AACACTATCA GTAA
|
|---|
| Protein sequence | MSRQCTHYGR WPQHDFTSLK KLRPQSVTSR IQPGSDVIVC AEMDEQWGYV GAKSRQRWLF
YAYDRIRRTV VAHVFGERTL ATLERLLSLL SAFEVVVWMT DGWPLYESRL KGKLHVISKR
YTQRIERHNL NLRQHLARLG RKSLSFSKSV ELHDKVIGHY LNIKHYQ
|
|---|
| |