| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0172 |
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| Symbol | |
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| ID | 6273519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 115777 |
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| End bp | 116502 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641728810 |
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| Product | type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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| Protein accession | YP_001883201 |
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| Protein GI | 187734478 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 108 |
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| Plasmid unclonability p-value | 0.0175289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGGT ATAAAGGTTT TATTTTATTC TTGTTGCTGA TGTTGATTGG ATGTGAGCAA
CGTGAAGAGT TAATTTCTAA TTTATCTCAA AGACAGGCAA ATGAAATAAT ATCTGTGCTA
GAACGCCATA ATATTACTGC TAGAAAAGTT GATGGAGGTA AACAGGGGAT CTCGGTACAA
GTCGAAAAGG GGACATTTGC ATCGGCAGTT GATTTGATGC GCATGTACGA TTTGCCAAAT
CCGGAGAGAG TTGATATCTC ACAAATGTTT CCTACAGATT CATTAGTGTC TTCTCCAAGA
GCTGAAAAGG CCCGTTTATA TAGTGCTATT GAGCAACGGC TGGAACAGTC TTTAGTTTCT
ATTGGTGGTG TTATTTCGGC AAAAATACAT GTTAGCTATG ATCTTGAAGA AAAAAATATA
TCTTCAAAAC CGATGCATAT ATCAGTAATC GCTATATATG ACTCACCGAA AGAGTCTGAA
CTATTAGTTA GTAATATTAA GCGATTTTTG AAAAACACCT TTTCTGATGT TAAGTATGAA
AATATATCTG TCATATTAAC TCCGAAAGAA GAATATGTTT ATACAAATGT ACAACCTGTT
AAGGAAATTA AATCGGAATT TTTAACAAAT GAAGTAATAT ATGTATTTCT CGGGATGGCT
GTACTAGTTG TCATTCTTTT GGTATGGGCA TTCAAAACAG GGTGGTTCAA GAGAAACAAA
ATATGA
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| Protein sequence | MIRYKGFILF LLLMLIGCEQ REELISNLSQ RQANEIISVL ERHNITARKV DGGKQGISVQ
VEKGTFASAV DLMRMYDLPN PERVDISQMF PTDSLVSSPR AEKARLYSAI EQRLEQSLVS
IGGVISAKIH VSYDLEEKNI SSKPMHISVI AIYDSPKESE LLVSNIKRFL KNTFSDVKYE
NISVILTPKE EYVYTNVQPV KEIKSEFLTN EVIYVFLGMA VLVVILLVWA FKTGWFKRNK
I
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