Gene SbBS512_A0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0125 
Symbol 
ID6273370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp80104 
End bp81135 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID641728770 
ProductIS630 transposase 
Protein accessionYP_001883161 
Protein GI187734511 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones150 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATCA TAGCACCAAT TTCCCGTGAC GAACGACGCC TGATGCAGAA AGCCATCCAT 
AAAACACACG ATAAAAATTA TGCCCGCAGA CTGACTGCCA TGCTGATGCT GCACCGGGGC
GACCGTGTCA GCGACGTTGC CAGAACGCTC TGCTGCGCCC GTTCCTCTGT TGGACGCTGG
ATTAACTGGT TCACGCAGTC GGGTGTTGAG GGACTGAAAT CATTACCTGC CGGGCGTGCC
CGTCGCTGGC CGTTTGAGCA TATCTGCACA CTGTTACGTG AGCTGGTAAA ACATTCTCCC
GGCGACTTTG GCTACCAGCG TTCACGCTGG AGTACAGAAC TGCTGGCAAT AAAAATCAAT
GAGATAACCG GTTGCCAGTT AAATGCCGGA ACCGTTCGCC GCTGGTTGCC GTCTGCGGGG
ATTGTGTGGC GAAGGGCTGC GCCAACTCTG CGTATCCGTG ACCCGCATAA AGATGAAAAG
ATGGCAGCAA TCCATAAAGC ACTGGACGAA TGCAGCGCAG AGCATCCGGT CTTTTATGAA
GATGAAGTGG ATATCCATCT TCATCCCAAA ATCGGTGCGG ACTGGCAACT GCGCGGACAG
CAAAAACGGG TGGTCACGCC GGGACAGAAT GAAAAATATT ATCTGGCCGG AGCGCTGCAC
AGCGGGACAG GTAAAGTCAG CTATGTGGGC GGCAACAGCA AAAGTTCGGC GCTGTTCATC
AGCCTGCTGA AGCGGCTTAA AGCGACATAC CGTCGGGCGA AAACCATCAC GCTGATCGTG
GACAACTACA TTATCCACAA AAGCCGGGAA ACACAGAGCT GGCTGAAGGA GAACCCGAAG
TTCAGGGGCA TTTATCAGCC GGTTTACTCG CCATGGGTGA ATCATGTTGA ACGGCTATGG
CAGGCACTTC ACGACACAAT AACGCGTAAT CATCAGTGCC GCTCAATGTG GCAACTGTTG
AAAAAAGTTC GCCATTTTAT GGAAACCGTC AGCCCATTCC CCGGAGGCAA ACATGGGCTG
GCAAAAGTGT AG
 
Protein sequence
MPIIAPISRD ERRLMQKAIH KTHDKNYARR LTAMLMLHRG DRVSDVARTL CCARSSVGRW 
INWFTQSGVE GLKSLPAGRA RRWPFEHICT LLRELVKHSP GDFGYQRSRW STELLAIKIN
EITGCQLNAG TVRRWLPSAG IVWRRAAPTL RIRDPHKDEK MAAIHKALDE CSAEHPVFYE
DEVDIHLHPK IGADWQLRGQ QKRVVTPGQN EKYYLAGALH SGTGKVSYVG GNSKSSALFI
SLLKRLKATY RRAKTITLIV DNYIIHKSRE TQSWLKENPK FRGIYQPVYS PWVNHVERLW
QALHDTITRN HQCRSMWQLL KKVRHFMETV SPFPGGKHGL AKV