| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0109 |
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| Symbol | |
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| ID | 6273610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | - |
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| Start bp | 68307 |
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| End bp | 69719 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641728756 |
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| Product | OspC1 |
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| Protein accession | YP_001883147 |
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| Protein GI | 187734494 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 117 |
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| Plasmid unclonability p-value | 0.645443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATAT CAGAAACACT GAACTCAGCA AATACCCAAT GCAATATAGA TTCTATGGAT
AACAGATTAC ATACATTATT TCCAAAAGTG ACATCAGTGC GAAACGCTGC ACAACAAACT
ATGCCAGATG AAAAAAATTT AAAAGATAGT GCAAATATTA TTAAAGATTT CTTTAGGAAA
ACTATAGCAG CACAGAGTTA TAGTAGAATG TTCTCTCAAG GCTCTAACTT TAAATCTTTA
AATATAGCAA TTGATGCACC ATCAGACGCT AAAGCCTCAT TTAAGGCTAT TGAGCACCTT
GACAGATTAT CGAAGCATTA TATATCTGAA ATAAGGGAAA AACTTCATCC TCTTTCTGCA
GAGGAACTCA ATTTGCTTTC GCTAATTATT AATTCTGATT TAATCTTCAG ACATCAAAGT
AATTCTGATT TGTCTGATAA AATTTTAAAC ATTAAGTCAT TCAATAAAAT TCAGTCTGAA
GGAATATGCA CAAAACGAAA CACATACGCT GATGATATAA AAAAAATAGC TAATCATGAC
TTTGTGTTTT TTGGCGTTGA AATCTCTAGC CATCAGAAAA AACACCCCCT GAATACAAAA
CATCACACTG TTGATTTTGG TGCAAATGCG TATATCATTG ATCATGACTC TCCATATGGA
TATATGACAT TAACCGATCA CTTTGATAAT GCTATTCCAC CTGTTTTTTA CCATGAGCAC
CAATCATTTT TAGATAAATT TTCAGAGGTT AATAAAGAAG TTAGTCGATA CGTACATGGA
AGTAAAGGAA TTATAGATGT ACCAATATTC AATACTAAAG ATATGAAGTT AGGGCTCGGA
TTATACCTGA TTGACTTTAT TAGAAAAAGT GAAGACCAAA GCTTCAAGGA GTTTTGCTAT
GGAAAAAATC TTGCCCCTGT GGATCTGGAT AGAATCATAA ACTTTGTTTT TCAGCCAGAG
TACCATATAC CTAGGATGGT AAGTACAGAA AACTTCAAAA AAGTTAAGAT TAGAGAAATA
TCCTTAGAGG AGGCTGTTAC AGCATCTAAT TACGAAGAAA TTAACAAGCA GGTCACTAAC
AAAAAAATTG CTCTCCAGAC TCTTTTTCTT TCGATTACTA ATCAAAAAGA GGATGTCGCC
TTATATATAT TATCTAATTT TGAGATAACT AGACAAGATG TTATTTCCAT AAAGCATGAG
TTGTATGATA TTGAGTATCT ACTTAGCGCT CATAATTCAA GCTGTAAAGT ACTTGAGTAT
TTTATCAATA AGGGATTGGT TGATGTAAAC ACAAAGTTCA AAAAAACTAA TAGTGGGGAT
TGTATGTTGG ATAACGCAAT AAAATATGAG AATGCAGAAA TGATAAAACT ATTATTGAAA
TATGGTGCAA CATCTGACAA TAAATATATT TAA
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| Protein sequence | MNISETLNSA NTQCNIDSMD NRLHTLFPKV TSVRNAAQQT MPDEKNLKDS ANIIKDFFRK
TIAAQSYSRM FSQGSNFKSL NIAIDAPSDA KASFKAIEHL DRLSKHYISE IREKLHPLSA
EELNLLSLII NSDLIFRHQS NSDLSDKILN IKSFNKIQSE GICTKRNTYA DDIKKIANHD
FVFFGVEISS HQKKHPLNTK HHTVDFGANA YIIDHDSPYG YMTLTDHFDN AIPPVFYHEH
QSFLDKFSEV NKEVSRYVHG SKGIIDVPIF NTKDMKLGLG LYLIDFIRKS EDQSFKEFCY
GKNLAPVDLD RIINFVFQPE YHIPRMVSTE NFKKVKIREI SLEEAVTASN YEEINKQVTN
KKIALQTLFL SITNQKEDVA LYILSNFEIT RQDVISIKHE LYDIEYLLSA HNSSCKVLEY
FINKGLVDVN TKFKKTNSGD CMLDNAIKYE NAEMIKLLLK YGATSDNKYI
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