| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0105 |
|---|
| Symbol | |
|---|
| ID | 6273523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010660 |
|---|
| Strand | - |
|---|
| Start bp | 64418 |
|---|
| End bp | 65626 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641728752 |
|---|
| Product | IS1294, transposase |
|---|
| Protein accession | YP_001883143 |
|---|
| Protein GI | 187734346 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 147 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAA GTGGTGGTGA TTTTCAGCCC CGCCCGCTGA AACGCCTGTT CACAGCCAAC
CAGTGCTGGA CGTCCTTCCT GGATGCGGGC GGTCTGCGCG ATATCGGGGT TGAGGCTGTC
ACAAAAATGC TGGCCTGCGG CACGCGGATA CTGGGAGTGA AGGAATACAT CTGCGATAAA
CCTGAGTGCC CCCACGTCAG ATACGTCACT AACTCATGCG GCAGCCGTGC CTGCCCGTCC
TGCGGAAAAA AGGCCACAGA CCTGTGGATA GCGACACAGC TGAATCGTCT TCCTGACTGC
GACTGGGTAC ACCTGGTCTT CACCCTGCCG GACACGCTGT GGCCGGTGTT CGAAAGCAAC
CGGTGGCTGC TGAATGACGT GTGCCGTCTG GCGGTGGAGA ATCTGCTGTA TGCCGCCCGG
AAACGGGGGC AGGAACCCGG TATCTTCTGC GCCATCCACA CGTATGGCCG TCGTCTCAAC
TGGCATCCGC ATGTACATGT GTCTGTAACC TGTGGAGGTC TGAATAAGCA TGGTCAGTGG
AAAAAGCTGA GCTTCCTGAA AGACTCGATG CGTTCACGGT GGATGTGGAA TATGCGGCAG
CTGCTTCTGA AAGCGTGGTC AGAGGGGCTG GCGATGCCGG AGTCGTTGTC ACATATCACG
ACGGAATCAC AGTGGAGAAG CCTGGTGCTG AAAGCCGGAG GAAAATACTG GCATGTGTAC
ATGTCGAAAA AAACGGCCGG CGGGAGGAAT ACGGCGCGCT ACCTGGGTCG TTATCTGAAG
AAGCCGCCGA TAGCGGCCTC CCGGCTGGCA CATTACAACG TAGGGGCGAG CCTGAACTTC
CGTTACCTGG ACCACAAAAC GGGAGAAACG GCGACGGAAA CGCTGACACA GCGTGAGCTG
GTCGCGAGGC TGAAACAGCA CATCCCGGAG AAGTTTTTTA AGATGGTGAG GTACTTCGGG
TTCCTTGCCA ACCGGGTGTG TGGAGAGAAG CTGCCGCAGG TGTACCGTGC TCTGGGGATG
GATAAACAGG AACCAGTGGC GAAAGTGTGC TATGCACAAA TGGTGAAACA GTTCCTGAGT
CGTGACTCGT TCGAATGCGT GCTGTGTGGC GGCCGGATGG TATACCGCCG GGCCATCGCG
GGACTGAATG TGGAGGGGCT GAAGAAAAAC GCGCGGGATA TCAGTCTGCT GAGGTATATG
CCGGCCTGA
|
|---|
| Protein sequence | MTRSGGDFQP RPLKRLFTAN QCWTSFLDAG GLRDIGVEAV TKMLACGTRI LGVKEYICDK
PECPHVRYVT NSCGSRACPS CGKKATDLWI ATQLNRLPDC DWVHLVFTLP DTLWPVFESN
RWLLNDVCRL AVENLLYAAR KRGQEPGIFC AIHTYGRRLN WHPHVHVSVT CGGLNKHGQW
KKLSFLKDSM RSRWMWNMRQ LLLKAWSEGL AMPESLSHIT TESQWRSLVL KAGGKYWHVY
MSKKTAGGRN TARYLGRYLK KPPIAASRLA HYNVGASLNF RYLDHKTGET ATETLTQREL
VARLKQHIPE KFFKMVRYFG FLANRVCGEK LPQVYRALGM DKQEPVAKVC YAQMVKQFLS
RDSFECVLCG GRMVYRRAIA GLNVEGLKKN ARDISLLRYM PA
|
|---|
| |