Gene SbBS512_A0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0080 
Symbol 
ID6273347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp50619 
End bp50945 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content54% 
IMG OID641728736 
ProductIS1203 transposase orfA 
Protein accessionYP_001883127 
Protein GI187734289 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value0.000000000000633207 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA ATACTCGTTT TTCCCCCGAA GTCCGTCAAC GGGCAGTCCG TATGGTTCTG 
GAAAGTCAGG GCGAATATGA CTCACAATGG GCGACAATTT GTTCCATTGC TCCAAAGATT
GGCTGTACGC CGGAGACTCT GCGTGTCTGG GTTCGCCAGC ATGAGCGGGA TACCGGGGGC
GGTGATGGAG GGCTCACCAC CGCTGAACGT CAGCGTCTGA AAGAGCTGGA GCGTGAAAAT
CGTGAACTGC GCCGCAGTAA CGATATCCTT CGCCAGGCTT CCGCTTATTT TGCGAAGGCG
GAGTTCGACC GCCTCTGGAA AAAATGA
 
Protein sequence
MTKNTRFSPE VRQRAVRMVL ESQGEYDSQW ATICSIAPKI GCTPETLRVW VRQHERDTGG 
GDGGLTTAER QRLKELEREN RELRRSNDIL RQASAYFAKA EFDRLWKK