| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0078 |
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| Symbol | |
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| ID | 6273404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | - |
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| Start bp | 48513 |
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| End bp | 50114 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641728735 |
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| Product | transposase family |
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| Protein accession | YP_001883126 |
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| Protein GI | 187734384 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 7.38697e-26 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAATG AACTCCCCGA TGATATTGAG CTGCTTAAAG CCATGTTGCG TAAGCAACAG
AGTCGGCTTC GACAGTATGC CTGTCAGGTC GCGGGCTATG AGCAGGAAAT TGAACGGCTG
AAAGCGCAAC TCGACAGGTT GCGTCGTATG CTGTTCGGCC AGAGTTCAGA GAAAAAGCGT
CATAAGCTTG AAAATCAGAT CCGACAGGCA GAAAAACGAC TGTCGGAACT GGAAAACCGA
CTGAACACAG CCAGAAATCT TCTGGAAGAT GCATCGTCAG TCACAGATTC ACCTGACACC
AGTCCCCCGT CAGAAAACCC GATCGCCAGT AAGCCTGAAT CCCCGGGACG AAAATCTTCA
CGAAAACCGC TGCCGGCAGA ACTTCCCCGG GAGACACATC GCCTTCTGCC TGCTGAAACC
AGTTGCCCGG CCTGTGGAGG TGTTCTGAAA GAAATGGGGG AAACAATCTC AGAGCAACTG
GATATCATTA ATACCGCCTT TAAAGTTATC GAAACCATAC GTCCCAAACT GGCCTGTAGC
CGGTGTGATG TCATCGTTCA GGCACCACTT CCCCCTAAAC CGATCGAACG CGGTTATGCC
AGTGCAGGGT TACTTGCACG GATCCTGGTC AGCAAATATA TGGAACATAT CCCTTTATAT
CGCCAGTCAG AAATATACGC GCGACAGGGC GTGGAGCTGA GCCGTAATAC CATGGTGCGC
TGGGTATCAG AAATGGCAGA CAAACTCCGT CCTCTGTATA TAGCGCTGAA TGACTATGTT
CTGGAGGCAG GAAAGGTGCA CGCAGATGAC ACTCCGGTGA AAGTACTGGC CCCGGGGAAC
GGAAAGACGA AAACGGGTCG TCTGTGGGTA TACGTCAGGG ATGATCGTAA TGCGGGTTCA
TCCCTGCCGG CAGCCGTCTG GTTCGCGTAT TCGGCAGATC GCAAAGGAGA ACATCCGCAG
CTCCACCTGG CAAAGTATCA GGGCGTACTG CAGGCTGATG CCTATGCAGG TTATAACGTA
CTGTACGAAA CGGGCCGGGT GAAGGAAGCC GGGTGCCTGG CCCACGCCCG CCGAAAAATC
CATGACGAGG ATGTGCGCCG TCCGACAGAA ATGACTCAGG AAGCGCTCAG ACGGATAGCA
GAGTTATACG ACATAGAAGC GGAGATACGT GGCAGTCCGG CAGAGGAACG GCTTGCAGTC
AGAAAAGCCA GAAGCGTCCA GTTGATGCAG TCATTGTACG ACTGGATACA GTTGCAGAGG
AAAACGCTGT CGAAACATGC GGAGATGGCG AAGGCGTTCG ACTATATCCT GAATCACTGG
AATGCGCTGA ACGAGTTCTG TCGTGACGGC TGGGTGGAAA TAGACAACAA CATCGGTGAA
AACGCGTTAC GATCGGTGGC GGTTGGAAGA AAAAATTATC TCTTTTTCGG CTCAGACAAG
GGAGGAGAAA GTGCGGCGAT CATCTACAGT CTGCTGGTCA CCTGCAAACA GAACGAAGTG
GAGCCGGAGG ACTGGTTGCG CGAAGTGATC GAGAAGCTCA ATGACTGGCC GTCGAACCAA
GTGCATGAAC TGCTGCCCTG GAACTTCTCG TCTGTAAAAT AA
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| Protein sequence | MNNELPDDIE LLKAMLRKQQ SRLRQYACQV AGYEQEIERL KAQLDRLRRM LFGQSSEKKR
HKLENQIRQA EKRLSELENR LNTARNLLED ASSVTDSPDT SPPSENPIAS KPESPGRKSS
RKPLPAELPR ETHRLLPAET SCPACGGVLK EMGETISEQL DIINTAFKVI ETIRPKLACS
RCDVIVQAPL PPKPIERGYA SAGLLARILV SKYMEHIPLY RQSEIYARQG VELSRNTMVR
WVSEMADKLR PLYIALNDYV LEAGKVHADD TPVKVLAPGN GKTKTGRLWV YVRDDRNAGS
SLPAAVWFAY SADRKGEHPQ LHLAKYQGVL QADAYAGYNV LYETGRVKEA GCLAHARRKI
HDEDVRRPTE MTQEALRRIA ELYDIEAEIR GSPAEERLAV RKARSVQLMQ SLYDWIQLQR
KTLSKHAEMA KAFDYILNHW NALNEFCRDG WVEIDNNIGE NALRSVAVGR KNYLFFGSDK
GGESAAIIYS LLVTCKQNEV EPEDWLREVI EKLNDWPSNQ VHELLPWNFS SVK
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