| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0048 |
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| Symbol | |
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| ID | 6273527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 28147 |
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| End bp | 29169 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641728714 |
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| Product | IS100 transposase orfA |
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| Protein accession | YP_001883105 |
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| Protein GI | 187734510 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 133 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACTT TTGAGACAGT TATGGAAATT AAAATCCTGC ACAAGCAGGG AATGAGTAGC
CGGGCGATTG CCAGAGAACT GGGGCTCTCC CGCAATACCG TTAAACGTTA TTTGCAGGCA
AAATCTGAGC CGCCAAAATA TACGCCGCGA CCTGCTGTTG CTTCACTCCT GGATGAATAC
CGGGATTATA TTCGTCAACG CATCGCCGAT GCTCATCCTT ACAAAATCCC GGCAACGGTA
ATCGCTCGCG AGATCAGAGA CCAGGGATAT CGTGGCGGAA TGACCATTCT CAGGGCATTC
ATTCGTTCTC TCTCGGTTCC TCAGGAGCAG GAGCCTGCCG TTCGGTTCGA AACTGAACCC
GGACGACAGA TGCAGGTTGA CTGGGGCACT ATGCGTAATG GTCGCTCACC GCTTCACGTG
TTCGTTGCTG TTCCCGGATA CAGTCGAATG TTGTACATCG AATTCACTGA CAATATGCGT
TATGACACGC TGGAGACCTG CCATCGTAAT GCGTTCCGCT TCTTTGGTGG TGTGCCGCGC
GAAGTGTTGT ATGACAATAT GAAAACTGTG GTTCTGCAAC GTGACGCATA TCAGACCGGT
CAGCACCGGT TCCATCCTTC GCTGTGGCAG TTCGGCAAGG AGATGGGCTT CTCTCCCCGA
CTGTGTCGCC CCTTCAGGGC ACAGACTAAA GGTAAGGTGG AACGGATGGT GCAGTACACC
CGTAACAGTT TTTACATCCC ACTAATGACT CGCCTGCGCC CGATGGGGAG CACTGTCGAT
GTTGAAACAG CCAACCGCCA CGGTCTGCGC TGGCTGCACG ATGTCGCTAA CCAACGAAAG
CATGAAACAA TCCAGGCCCG TCCCTGTGAT CGCTGGCTCG AAGAGCAGCA GTCCATGCTG
GCACTGCCTC CGGAGAAAAA AGAGTATGAC GTGCATCCTG GTGAAAATCT GGTGAGCTTC
GACAACCCCC CCCAGCATCA TCCACTCTCC ATCTACGACT CATTCTGCAG AGGAGTGGCG
TGA
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| Protein sequence | MVTFETVMEI KILHKQGMSS RAIARELGLS RNTVKRYLQA KSEPPKYTPR PAVASLLDEY
RDYIRQRIAD AHPYKIPATV IAREIRDQGY RGGMTILRAF IRSLSVPQEQ EPAVRFETEP
GRQMQVDWGT MRNGRSPLHV FVAVPGYSRM LYIEFTDNMR YDTLETCHRN AFRFFGGVPR
EVLYDNMKTV VLQRDAYQTG QHRFHPSLWQ FGKEMGFSPR LCRPFRAQTK GKVERMVQYT
RNSFYIPLMT RLRPMGSTVD VETANRHGLR WLHDVANQRK HETIQARPCD RWLEEQQSML
ALPPEKKEYD VHPGENLVSF DNPPQHHPLS IYDSFCRGVA
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