Gene SbBS512_A0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0042 
Symbol 
ID6273538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand+ 
Start bp26000 
End bp26584 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content53% 
IMG OID641728710 
ProductISEc17, transposase orfB 
Protein accessionYP_001883101 
Protein GI187734491 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones158 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAAAT TGATCTTACC CAGCAATACG GTCAGTTACC GCGCACATGG CCTGCCTGTG 
TCAGAAAATC TGCTGGAGCA GGATTTTTAC GCCAGTGGTC CGAACCAGAA GTGGGCGGGA 
GACATCACGT ACTTACGTAC AGATGAAGGC TGGCTGTATC TGGCTGTGGT CATTGACCTG 
TGGTCACGTG CCGTTATTGG CTGGTCCATG TCACCACGCC TGACGGCGCA ACTGGCCTGC 
GATGCCCTGC AGATGGCGCT GTGGCGGCGT AAGAGACCCC GGAACGTTAT CGTTCACTCG 
GACCGAGGAA GTCAGTACTG TTCAGCAGAT TATCAGGCGC TGCTGAAGTG GCATAATCTG 
CGTGGCAGTA TGAGCGCAAA GGGCTGCTGC TACGATAATG CCTGCGTGGA AAGCTTCTTT 
CATTCGCTGA AAGTGGAATG TCTCCACGGA GAACACTTTA TCAGCCGGGA AATAATGCGG 
GCAACAGTGT TTAATTATAT CGAATGTGAT TACAATCGCT GGCGACGGCA CAGTTGGTGT 
GGCGGCCTCA GTCCGGAACA ATTTGAAAAC CAGAACCTCG CTTAG
 
Protein sequence
MSKLILPSNT VSYRAHGLPV SENLLEQDFY ASGPNQKWAG DITYLRTDEG WLYLAVVIDL 
WSRAVIGWSM SPRLTAQLAC DALQMALWRR KRPRNVIVHS DRGSQYCSAD YQALLKWHNL 
RGSMSAKGCC YDNACVESFF HSLKVECLHG EHFISREIMR ATVFNYIECD YNRWRRHSWC 
GGLSPEQFEN QNLA