Gene SbBS512_D0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_D0004 
Symbol 
ID6273322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010659 
Strand
Start bp3845 
End bp4828 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content33% 
IMG OID641728680 
Producthypothetical protein 
Protein accessionYP_001883071 
Protein GI187734268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTG GTAAAGCCTT CGATACAAGG AGTGATTGCA TCAATGGCAC ATGGAGTGAA 
AAAGAGGATA ATCGAGGCAG AACCATCGTC ACATATACCT GTGATATTAG TGAAAGTGGC
CTAAAAATAA TAAATTCAGC CATTATGCAA GAACCTGAAG ATAAGGCTGA ATATTCTATA
ACACAAAATA ACAACAGCAT AAAATCAACC AATGAATCAC TAGAGGAATA CAAACAGAAA
ACGCCTCTGG TGGAAAAAAC AAAAGAGGTC ATAATAGATC ATATAAGAAA GCTAAACAGT
GCTTTTAATG AAGATCCAAT GATATATAGC AAACTCACAA TTAGCCCTTA TTTAGACAGA
ATGCTATATC TAAAGGACCA TAATGACAAT GCGCTAAATG AAATTTGTGG TGGGTACGAA
TACATTCAAT CTGCCGATAG TTACAGTTGG CGTGATGTAA GTGAAGAGTA TGCAAAAGAA
TCATGCGAAA AGCATATATA TAAAGTATAT CAATCATTTA AGAAAAATGC ATCACCATTA
ATAACTAAAA ACTTCCCCGG TTTCTACGAA CGTGTCCCCC CCTGTGAGAA CGCAGATGAA
TGCATAAAAA AAACAAATAT ATACTTTGAT GATAACTTTC TAAATATCTA CAAAAGAAGC
CAAGATAGAG CACCTCAAAT AATTTCTGAT TTAAAAAAAC ACAATATAGA AATAGGTGAA
AAGTTAAATG ATTGCAGAAA AAAACTAAAT ATCTCAGATG CCAAATTAAC CTATTACTGG
TTTGTAACAG ACACCGGAGG AGTTGATTAT TTAGATGGGG TGTTGACATA TAATTTTCAG
GGAAAGAATA GGGCTGAAAA CTTTCATAAA CAACTATTGC AATATGCATA CATTAACTAC
AGCAAAAATC AAATACCTCG GGACTTTGTA ACATCAATAA AAAATAGTAT TTATTATAAA
ATAGAAGATT GCACTAAGTT TTAG
 
Protein sequence
MTVGKAFDTR SDCINGTWSE KEDNRGRTIV TYTCDISESG LKIINSAIMQ EPEDKAEYSI 
TQNNNSIKST NESLEEYKQK TPLVEKTKEV IIDHIRKLNS AFNEDPMIYS KLTISPYLDR
MLYLKDHNDN ALNEICGGYE YIQSADSYSW RDVSEEYAKE SCEKHIYKVY QSFKKNASPL
ITKNFPGFYE RVPPCENADE CIKKTNIYFD DNFLNIYKRS QDRAPQIISD LKKHNIEIGE
KLNDCRKKLN ISDAKLTYYW FVTDTGGVDY LDGVLTYNFQ GKNRAENFHK QLLQYAYINY
SKNQIPRDFV TSIKNSIYYK IEDCTKF