Gene SbBS512_E4948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4948 
Symbol 
ID6270276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4612523 
End bp4613875 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content50% 
IMG OID641728673 
Producthypothetical protein 
Protein accessionYP_001883064 
Protein GI187732050 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAAT CCCCCCTGTT CTGGAAAATG ACCACCTTGT TTGGTGCAGT ATTGCTGTTG 
TTGATTCCGA TAATGCTGAT TCGGCAAGTG ATTGTCGAAC GTGCCGATTA CCGTAGCGAT
GTGGAAGATG CGATTCGCCA AAGTACCAGC GGGCCGCAAA AACTCGTTAG GCCGCTTATC
GCTATTCCTG TGACCGAGCT TTATACGGTG CAGGAAGAGG ATAAAACCGT GGAGCGGAAA
CGAAGTTTTA TCCATTTTTG GTTACCTGAG TCATTGATGG TTGATGGCAA TCAGAACGTG
GAAGAACGCA AGATAGGGAT TTATACCGGT CAGGTCTGGC ACAGTGATTT AACGCTAAAA
GCCGATTTCG ATGTTTCGCG TCTTAGCGAG CTCAACGCGC CAAATATCAT CTTAGGCAAG
CCCTTTATTG TGATTAGCGT CGGGGATGCG CGTGGTATTG GTGTGGTGAA AGCGCCTGAA
GTTAACGGAA CGGCACTGAC CATTGAACCC GGTACCGGGT TAGAGCAAGG CGGGCAGGGC
GTGCATATCC CTTTACCCGA AGGGGACTGG CGGAAGCAGA ACCTGCAGCT GAATATGGCA
CTGAATTTAA GCGGTACCGG CGATCTTTCT GTGGTGCCTG CCGGGCGTAA TAGCGAAATG
ACCTTAACCA GCAACTGGCC GCATCCCAGT TTTTTAGGTG ATTTTCTACC AGCCAAACGG
GAAGTTAGCG AGTCAGGTTT TCAGGCGCAA TGGCAAAGCA GCTGGTTTGC TAATAATCTC
GGTGAGCGTT TTGCTTCAGG CAATGATACC GGCTGGGAAA ACTTCCCCGC GTTTAGCGTC
GCAGTGACGA CGCCAGCCGA TCAATACCAA TTAACGGACC GGGCGACTAA GTACGCCATT
CTGCTGATTG CACTGACTTT TATGGCGTTC TTTGTTTTTG AAACGCTCAC CGCGCAACGT
TTACACCCAA TGCAATATTT GCTGGTGGGG CTTTCATTGG TGATGTTTTA TTTGCTCTTG
CTGGCGCTTT CTGAACATAT CGGTTTTACC GTGGCATGGA TAATCGCCAG TCTGATTGGG
GCGTTAATGA ACGGTGTTTA TTTGCAGGCG GTATTGAAAG GTTGGCGCAA CAGCATGTTG
TTTACCCTCG CGCTGTTGTT GCTGGATGGT GTGATGTGGG GACTGCTCAA CTCTGCCGAT
AGCGCGCTGT TGTTGGGAAC CAGTGTGCTG GTGGTGGCGC TGGCCGGCAT GATGTTTGTG
ACTCGTAATA TCGACTGGTA TGCGTTTTCA CTGCCGAAAA TGAAAGCCAG TAAAGAAGTT
ACAATGGACG ATCAATTACG TATCTGGAAA TAA
 
Protein sequence
MLKSPLFWKM TTLFGAVLLL LIPIMLIRQV IVERADYRSD VEDAIRQSTS GPQKLVRPLI 
AIPVTELYTV QEEDKTVERK RSFIHFWLPE SLMVDGNQNV EERKIGIYTG QVWHSDLTLK
ADFDVSRLSE LNAPNIILGK PFIVISVGDA RGIGVVKAPE VNGTALTIEP GTGLEQGGQG
VHIPLPEGDW RKQNLQLNMA LNLSGTGDLS VVPAGRNSEM TLTSNWPHPS FLGDFLPAKR
EVSESGFQAQ WQSSWFANNL GERFASGNDT GWENFPAFSV AVTTPADQYQ LTDRATKYAI
LLIALTFMAF FVFETLTAQR LHPMQYLLVG LSLVMFYLLL LALSEHIGFT VAWIIASLIG
ALMNGVYLQA VLKGWRNSML FTLALLLLDG VMWGLLNSAD SALLLGTSVL VVALAGMMFV
TRNIDWYAFS LPKMKASKEV TMDDQLRIWK