| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4943 |
|---|
| Symbol | rob |
|---|
| ID | 6272519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 4608786 |
|---|
| End bp | 4609655 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641728669 |
|---|
| Product | right origin-binding protein |
|---|
| Protein accession | YP_001883060 |
|---|
| Protein GI | 187732808 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCAGG CCGGCATTAT TCGCGACCTT TTAATCTGGC TGGAAGGTCA TCTGGATCAG
CCCCTGTCGC TCGACAATGT AGCGGCGAAA GCAGGTTATT CCAAGTGGCA CTTACAGAGA
ATGTTTAAAG ATGTCACTGG CCATGCTATT GGCGCGTATA TTCGTGCTCG TCGTTTGTCG
AAATCGGCGG TCGCACTACG CCTGACTGCG CGTCCGATTC TGGACATCGC GCTGCAATAC
CGCTTCGACT CTCAACAGAC ATTTACCCGC GCATTCAAGA AGCAGTTTGC CCAGACTCCT
GCACTTTACC GCCGTTCTCC TGAATGGAGC GCCTTTGGTA TTCGCCCGCC GCTACGTCTG
GGTGAATTCA CAATGCCAGA GCACAAATTT GTCACCCTGG AAGATACGCC GCTGATTGGT
GTTACCCAGA GCTACTCCTG TTCGCTGGAG CAAATATCTG ATTTCCGCCA TGAAATGCGT
TATCAGTTCT GGCACGATTT TCTCGGCAAC GCGCCGACCA TTCCGCCAGT GCTCTACGGC
CTGAATGAAA CGCGTCCGAG TCAGGATAAA GACGACGAAC AAGAGGTATT CTATACCACC
GCGTTAGCCC AGGATCAGGC AGATGGCTAT GTACTGACGG GGCATCCGGT GATGCTGCAG
GGCGGCGAAT ATGTGATGTT TACCTATGAA GGTCTGGGAA CCGGCGTGCA GGAGTTTATC
CTGACGGTAT ACGGAACGTG CATGCCAATG CTCAACCTGA CGCGCCGTAA AGGTCAGGAT
ATTGAGCGAT ACTACCCGGC AGAAGACGCC AAAGCGGGAG ATCGCCCAAT TAATCTGCGC
TGTGAACTGC TGATTCCTAT CCGCCGTTAA
|
|---|
| Protein sequence | MDQAGIIRDL LIWLEGHLDQ PLSLDNVAAK AGYSKWHLQR MFKDVTGHAI GAYIRARRLS
KSAVALRLTA RPILDIALQY RFDSQQTFTR AFKKQFAQTP ALYRRSPEWS AFGIRPPLRL
GEFTMPEHKF VTLEDTPLIG VTQSYSCSLE QISDFRHEMR YQFWHDFLGN APTIPPVLYG
LNETRPSQDK DDEQEVFYTT ALAQDQADGY VLTGHPVMLQ GGEYVMFTYE GLGTGVQEFI
LTVYGTCMPM LNLTRRKGQD IERYYPAEDA KAGDRPINLR CELLIPIRR
|
|---|
| |