| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4940 |
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| Symbol | slt |
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| ID | 6268607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4605131 |
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| End bp | 4607068 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641728665 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_001883056 |
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| Protein GI | 187730731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAG CCAAACAAGT TACCTGGCGG CTGTTGGCTG CCGGTGTCTG TCTGCTGACG
GTCAGCAGCG TGGCGCGAGC CGACTCACTG GATGAGCAGC GTAGCCGTTA CGCGCAAATC
AAGCAGGCCT GGGATAATCG ACAAATGGAT GTGGTCGAAC AAATGATGCC TGGACTGAAG
GATTATCCGC TTTATCCCTA CCTGGAATAC CGCCAGATCA CCGATGATCT GATGAATCAA
CCGGCGGTGA CGGTCACTAA CTTTGTTCGC GCTAACCCCA CGCTTCCTCC CGCTCGCACG
CTGCAATCTC GTTTCGTCAA TGAACTGGCG CGGCGTGAAG ACTGGCGTGG CTTGTTAGCC
TTTAGCCCGG AAAAGCCCGG AACTACCGAA GCGCAATGTA ATTACTACTA TGCGAAATGG
AACACCGGGC AGAGTGAAGA AGCCTGGCAA GGGGCGAAAG AGCTGTGGCT AACCGGCAAG
AGCCAGCCTA ACGCCTGTGA CAAGTTATTT AGCGTCTGGC GTGCGTCAGG TAAACAAGAT
CCGCTGGCGT ATTTAGAGCG TATCCGTCTG GCGATGAAAG CGGGTAACAC TGGCCTGGTA
ACAGTGCTGG CAGGGCAGAT GCCTGCCGAT TACCAGACTA TCGCCTCGGC AATCATTTCA
CTGGCGAACA ACCCTAATAC GGTACTGACC TTCGCGCGTA CAACCGGAGC GACCGATTTT
ACCCGTCAAA TAGCAGCGGT GGCGTTTGCC AGTGTGGCGC GGCAGGATGC TGAAAATGCA
CGGCTGATGA TCCCGTCGCT TGCCCAGGCG CAGCAGCTTA ATGAAGATCA GATTCAGGAG
CTGCGCGATA TCGTCGCCTG GCGTTTGATG GGCAACGATG TCACCGACGA GCAGGCGAAA
TGGCGCGATG ACGCCATTAT GCGCTCGCAA TCCACGTCGT TGATTGAACG CCGTGTGCGA
ATGGCACTTG GCACCGGCGA TCGTCGCGGC CTGAATACCT GGCTGGCGCG TCTGCCGATG
GAAGCAAAAG AGAAAGATGA ATGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAACGCGGA
CGTGAAGCTG AAGCGAAAGA GATTTTGCAT CAACTCATGC AACAGCGAGG TTTCTACCCG
ATGGTTGCAG CACAACGCAT CGGAGAAGAG TATGAGCTGA AGATTGATAA AGCGCCGCAG
AATGTTGACA GCGCCCTGAC TCAGGGGCCG GAGATGGCGC GCGTGCGCGA GTTGATGTAC
TGGAATCTCG ATAACACCGC GCGTAGCGAG TGGGCCAATC TGGTGAAGAG CAAGTCAAAA
ACAGAGCAGG CTCAACTGGC TCGGTATGCT TTCAATAACC AATGGTGGGA TCTTAGCGTT
CAGGCAACGA TCGCCGGGAA GCTTTGGGAT CATCTGGAAG AGCGATTCCC GCTGGCTTAC
AACGATCTTT TCAAACGTTA CACCAGTGGG AAAGAGATCC CGCAAAGCTA TGCGATGGCG
ATTGCCCGTC AGGAGAGCGC CTGGAATCCG AAAGTGAAAT CACCGGTAGG GGCCAGCGGC
CTGATGCAGA TTATGCCTGG TACAGCGACC CATACGGTGA AGATGTTCTC TATTCCTGGT
TATAGCAGCC CTGGGCAATT GCTGGATCCG GAAACGAATA TCAACATTGG CACCAGTTAC
CTGCAATATG TTTATCAGCA GTTTGGCAAT AACCGTATTT TCTCCTCAGC AGCTTATAAC
GCCGGACCTG GACGGGTGCG AACCTGGCTT GGCAACAGCG CCGGGCGTAT CGACGCTGTG
GCATTTGTCG AGAGTATTCC GTTCTCCGAG ACGCGCGGTT ATGTGAAGAA CGTGCTGGCT
TATGACGCTT ACTACCGTTA TTTCATGGGG GATAAACCGA CGTTGATGAG CGCCACGGAA
TGGGGACGTC GTTACTGA
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| Protein sequence | MEKAKQVTWR LLAAGVCLLT VSSVARADSL DEQRSRYAQI KQAWDNRQMD VVEQMMPGLK
DYPLYPYLEY RQITDDLMNQ PAVTVTNFVR ANPTLPPART LQSRFVNELA RREDWRGLLA
FSPEKPGTTE AQCNYYYAKW NTGQSEEAWQ GAKELWLTGK SQPNACDKLF SVWRASGKQD
PLAYLERIRL AMKAGNTGLV TVLAGQMPAD YQTIASAIIS LANNPNTVLT FARTTGATDF
TRQIAAVAFA SVARQDAENA RLMIPSLAQA QQLNEDQIQE LRDIVAWRLM GNDVTDEQAK
WRDDAIMRSQ STSLIERRVR MALGTGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG
REAEAKEILH QLMQQRGFYP MVAAQRIGEE YELKIDKAPQ NVDSALTQGP EMARVRELMY
WNLDNTARSE WANLVKSKSK TEQAQLARYA FNNQWWDLSV QATIAGKLWD HLEERFPLAY
NDLFKRYTSG KEIPQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPG
YSSPGQLLDP ETNINIGTSY LQYVYQQFGN NRIFSSAAYN AGPGRVRTWL GNSAGRIDAV
AFVESIPFSE TRGYVKNVLA YDAYYRYFMG DKPTLMSATE WGRRY
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