Gene SbBS512_E4934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4934 
Symbol 
ID6269076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4598544 
End bp4599188 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID641728659 
Producthypothetical protein 
Protein accessionYP_001883050 
Protein GI187732551 
COG category[R] General function prediction only 
COG ID[COG3726] Uncharacterized membrane protein affecting hemolysin expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.921583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCA CAAAACTGAA ATTCCGGCTG CATCGGGCAG TGATTGTCCT GTTCTGTCTT 
GCCTTGTTAG TGGCGCTGAT GCAGGGAGCG TCATGGTTTA GTCAAAACCA CCAGCGACAA 
CGTAATCCAC AGCTGGAAGA ACTGGCCCGC ACCCTGGCGC GTCAGGTAAC GCTGAACGTT 
GCACCGCTGA TGCGTACCGA CTCACCGGAT GAAAAACGCA TTCAGGCGAT CCTCGATCAG 
TTAACGGATG AAAGCCGTAT CCTCGACGCG GGTGTGTATG ACGAACAAGG CGATCTTATC 
GCACGTTCTG GCGAAAGCGT CGAAGTGCGC GACCGGCTGG CGCTCGACGG TAAAAAAGCG 
GGCGGCTATT TTAACCAGCA GATTGTCGAA CCAATTGCCG GGAAAAACGG ACCGCTCGGC 
TATCTGCGCC TGACGCTCGA CACCCATACG CTCGCCACCG AAGCCCAACA GGTGGATAAC 
ACCACTAACA TTTTACGCCT GATGTTGCTG CTTTCACTGG CAATCGGCGT AGTGCTGACC 
CGCACGCTGC TACAGGGTAA ACGTACCCAC TGGCAGCAAT CGCCCTTCCT GTTAACCGCC 
AGCAAACCGG TGCCGGAAGA GGAAGAAAGC GAGAAAAAAG AGTGA
 
Protein sequence
MARTKLKFRL HRAVIVLFCL ALLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNV 
APLMRTDSPD EKRIQAILDQ LTDESRILDA GVYDEQGDLI ARSGESVEVR DRLALDGKKA 
GGYFNQQIVE PIAGKNGPLG YLRLTLDTHT LATEAQQVDN TTNILRLMLL LSLAIGVVLT 
RTLLQGKRTH WQQSPFLLTA SKPVPEEEES EKKE