Gene SbBS512_E4902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4902 
SymboldnaT 
ID6269630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4574630 
End bp4575169 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID641728632 
Productprimosomal protein DnaI 
Protein accessionYP_001883026 
Protein GI187734183 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000841068 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCA GAGTTTTGAC CCCGGACGTC GTTGGTATTG ACGCCCTGGT ACACGATCAC 
CAAACCGTTC TGGCAAAAGC TGAAGGCGGT GTGGTTGCCG TATTTGCTAA CAATGCCCCG
GCGTTTTATG CCGTCACGCC TGCACGCCTG GCTGAACTGC TGGCGCTGGA AGAAAAGCTG
GCGCGTCCGG GAAGCGATGT CGCTCTGGAC GATCAACTCT ATCAGGAACC GCAAGCCGCT
CCCGTTGCTG TACCCATGGG GAAATTCGCC ATGTATCCGG ACTGGCAACC CGATGCCGAT
TTTATCCGCC TGGCGGCGCT ATGGGGTGTG GCACTAAGAG AGCCGGTGAC CACCGAAGAA
CTGGCCTCAT TCATTGCCTA CTGGCAGGCG GAAGGTAAAG TCTTTCACCA TGTGCAGTGG
CAACAAAAAC TGGCGCGCAG CCTGCAAATC GGTCGTGCCA GCAACGGCGG ACTGCCGAAA
CGAGATGTGA ATACGGTCAG CGAACCTGAC AGTCAAATTC CACCAGGATT CAGAGGGTAA
 
Protein sequence
MSSRVLTPDV VGIDALVHDH QTVLAKAEGG VVAVFANNAP AFYAVTPARL AELLALEEKL 
ARPGSDVALD DQLYQEPQAA PVAVPMGKFA MYPDWQPDAD FIRLAALWGV ALREPVTTEE
LASFIAYWQA EGKVFHHVQW QQKLARSLQI GRASNGGLPK RDVNTVSEPD SQIPPGFRG