Gene SbBS512_E4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4898 
Symbol 
ID6271442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp4569641 
End bp4570663 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content51% 
IMG OID641728628 
Productoxidoreductase, zinc-binding dehydrogenase family 
Protein accessionYP_001883022 
Protein GI187730957 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACGA TGAATGTTTT AATTTGCCAG CAGCCGAAAG AATTAGTCTG GAAACAACGC 
GAGATACCTA TTCCGGGTGA CAATGAAGCA TTAATAAAAA TTAAGTCTGT CGGGATTTGC 
GGTACCGATA TTCATGCCTG GGGTGGAAAT CAACCATTTT TTAGTTATCC ACGTGTTTTA 
GGCCATGAAA TATGTGGGGA GATTGTTAGG CTGGGTAAAA ATATTGCTGA TCTTAAAAAT 
GGTCAGCAAG TTGCTGTGAT CCCTTATGTT GCCTGTCAGC AATGCCCGGC GTGTAAAAGC 
GGGCGTACCA ATTGCTGTGA AAAAATTTCA GTCATTGGCG TGCATCAGGA TGGCGGTTTT 
AGTGAGTATT TGAGCGTGCC GGTGGCGAAC ATTTTGCCCG CAGACGGTAT TGACCCGCAG 
GCGGCAGCAT TGATTGAACC TTTCGCTATT AGCGCTCATG CGGTGCGTCG CGCAGCCATT 
GCTCCCGGCG AGCAGGTGCT GGTGGTCGGG GCGGGGCCAA TCGGTCTGGG CGCGGCGGCA 
ATCGCTAAAG CCGATGGCGC ACAGGTGGTG GTGGCGGATA CCAGTCCGGC GCGCCGTGAA 
CATGTGGCAA CGCGTCTGGA ATTACCTTTA CTGGACCCGT CAGCCGAAGA TTTTGACGCG 
CAGCTACAGG CGCAGTTTGG TGGTTCGCTG GCGCAGAAAG TGATCGACGC GACAGGTAAT 
CAACATGCGA TGAATAACAC CGTGAATTTG ATTCGTCACG GCGGCACGGT GGTATTTGTC 
GGCCTGTTTA AAGGTGAGTT GCAGTTCTCC GATCCGGAAT TCTATAAAAA AGAAACGACG 
ATGATGGGTA GCCGCAACGC CACGCCGGAA GATTTTGCTA AAGTCGGTCG ACTGATGGCG 
GAAGGAAAAA TCACTGCTGA CATGATGTTA ACCCATCGCT ATCCGTTCGC CACGCTGGCA 
GAAACCTACG AGCGCGATGT GATTAACAAT CGTGAGTTGA TTAAGGGTGT AATTACTTTC 
TGA
 
Protein sequence
MSTMNVLICQ QPKELVWKQR EIPIPGDNEA LIKIKSVGIC GTDIHAWGGN QPFFSYPRVL 
GHEICGEIVR LGKNIADLKN GQQVAVIPYV ACQQCPACKS GRTNCCEKIS VIGVHQDGGF 
SEYLSVPVAN ILPADGIDPQ AAALIEPFAI SAHAVRRAAI APGEQVLVVG AGPIGLGAAA 
IAKADGAQVV VADTSPARRE HVATRLELPL LDPSAEDFDA QLQAQFGGSL AQKVIDATGN 
QHAMNNTVNL IRHGGTVVFV GLFKGELQFS DPEFYKKETT MMGSRNATPE DFAKVGRLMA 
EGKITADMML THRYPFATLA ETYERDVINN RELIKGVITF