Gene SbBS512_E4891 details

Gene Information

• Locus tag: SbBS512_E4891
• Symbol: hpaR
• ID: 6271107
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 4564136
• End bp: 4564582
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641728623
• Product: homoprotocatechuate degradation operon regulator, HpaR
• Protein accession: YP_001883017
• Protein GI: 187731459
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators
• TIGRFAM ID: [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACGACT CACTAACCAT TGCGTTGCTC CAGGCGCGAG AAGCGGCGAT GAGTTATTTT 
CGCCCAATCG TTAAACGGCA TAATTTGACT GAGCAACAGT GGCGCATCGT GCGTATTCTG 
GCGGAAAGCC CATCAATGGA TTTTCACGAT CTGGCGTATC GCGCCTGCAT TTTGCGCCCA 
AGCCTGACCG GGATTCTCAC GCGGATGGAA CGCGACGGTT TAGTGTTGCG ATTAAAGCCG 
ATCAATGATC AGCGGAAGCT CTATATCTCG CTAACCAAAG AGGGGCAGGC GCTGTATAAC 
CGCGCTCAGA CACAGATTGA AGAAGCCTAT CGGCAGATTG AAGCTCAGTT TACTGCCGAG 
AAAATGCAAC AGTTAACCCA TCTGTTAGAG GAATTTATTG CTCTGGGCAA TTCCCGACAA 
GAAGCCATCC CGGGCGATAA TGAATAA 

 

Protein sequence

MHDSLTIALL QAREAAMSYF RPIVKRHNLT EQQWRIVRIL AESPSMDFHD LAYRACILRP 
SLTGILTRME RDGLVLRLKP INDQRKLYIS LTKEGQALYN RAQTQIEEAY RQIEAQFTAE 
KMQQLTHLLE EFIALGNSRQ EAIPGDNE