Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4891 |
Symbol | hpaR |
ID | 6271107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4564136 |
End bp | 4564582 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641728623 |
Product | homoprotocatechuate degradation operon regulator, HpaR |
Protein accession | YP_001883017 |
Protein GI | 187731459 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGACT CACTAACCAT TGCGTTGCTC CAGGCGCGAG AAGCGGCGAT GAGTTATTTT CGCCCAATCG TTAAACGGCA TAATTTGACT GAGCAACAGT GGCGCATCGT GCGTATTCTG GCGGAAAGCC CATCAATGGA TTTTCACGAT CTGGCGTATC GCGCCTGCAT TTTGCGCCCA AGCCTGACCG GGATTCTCAC GCGGATGGAA CGCGACGGTT TAGTGTTGCG ATTAAAGCCG ATCAATGATC AGCGGAAGCT CTATATCTCG CTAACCAAAG AGGGGCAGGC GCTGTATAAC CGCGCTCAGA CACAGATTGA AGAAGCCTAT CGGCAGATTG AAGCTCAGTT TACTGCCGAG AAAATGCAAC AGTTAACCCA TCTGTTAGAG GAATTTATTG CTCTGGGCAA TTCCCGACAA GAAGCCATCC CGGGCGATAA TGAATAA
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Protein sequence | MHDSLTIALL QAREAAMSYF RPIVKRHNLT EQQWRIVRIL AESPSMDFHD LAYRACILRP SLTGILTRME RDGLVLRLKP INDQRKLYIS LTKEGQALYN RAQTQIEEAY RQIEAQFTAE KMQQLTHLLE EFIALGNSRQ EAIPGDNE
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