| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4889 |
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| Symbol | hpaE |
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| ID | 6270890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4561112 |
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| End bp | 4562578 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641728621 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001883015 |
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| Protein GI | 187731525 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TAAATCATTG GATCAACGGC AAAAATGTTG CAGGTAACGA CTACTTCCAG
ACCACCAATC CGGCAACGGG TGAAGTGCTG GCGGATGTGG CCTCTGGCGG TGAAGCGGAG
ATCAATCAGG CGGTAGCGGC AGCGAAAGAG GCGTTCCCGA AATGGGCCAA TCTGCCGATG
AAAGAGCGTG CGCGCCTGAT GCGCCGTCTG GGCGATCTGA TCGACCAGAA CGTGCCAGAG
ATCGCCGCGA TGGAAACCGC GGACACCGGC CTGCCGATCC ATCAGACCAA AAATGTGTTG
ATCCCACGCG CTTCCCACAA CTTTGAATTT TTCGCGGAAG TCTGCCAGCA GATGAACGGC
AAGACCTATC CGGTTGACGA CAAGATGCTC AACTACACGC TGGTGCAGCC GGTGGGCGTT
TGTGCGCTGG TATCGCCGTG GAACGTACCG TTTATGACCG CCACATGGAA GGTCGCGCCG
TGTCTGGCGC TGGGCAATAC CGCGGTACTG AAAATGTCGG AACTCTCCCC GCTGACCGCT
GACCGCCTGG GTGAGCTGGC GCTGGAAGCC GGTATTCCGG CAGGCGTGCT GAACGTGGTA
CAGGGCTACG GCGCAACCGC AGGGGATGCG CTGGTTCGTC ATCATGACGT ACGTGCCGTG
TCGTTCACCG GCGGTACGGC CACCGGGCGC AACATCATGA AAAACGCCGG GCTGAAAAAA
TACTCCATGG AACTGGGCGG TAAATCGCCG GTGCTGATTT TTGAAGATGC CGATATTGAA
CGCGCGCTGG ACGCCGCCCT GTTCACCATC TTCTCGATCA ACGGCGAACG CTGCACCGCC
GGTTCACGCA TCTTTATTCA GCAAAGCATC TACCCGGAAT TCGTTAAACG CTTTGCCGAA
CGCGCCAACC GTCTGCGCGT GGGCGATCCG AACGATCCGA ATACCCAGGT TGGCGCGCTT
ATCAGCCAGC AGCACTGGGA AAAAGTCTCC GGCTATATCC GTCTCGGCAT TGAAGAAGGC
GCCACCCTGC TGGCGGGCGG CCCGGATAAA CCGTCTGACC TGCCTGCACA CCTGAAAGGC
GGCAACTTCC TGCGCCCAAC GGTGCTGGCA GACGTTGATA ACCGTATGCG AGTCGCCCAA
GAAGAGATTT TCGGGCCGGT CGCCTGCCTG CTGCCGTTTA AAGACGAAGC TGAAGGCTTA
CGCCTGGCAA ACGACGTGGA GTACGGCCTC GCGTCGTACA TCTGGACACA GGATGTCAGC
AAAGTGTTAC GCCTGGCGCG TGGCATTGAA GCTGGCATGG TGTTCGTCAA CACCCAGAAC
GTGCGTGACC TGCGCCAGCC ATTTGGCGGC GTAAAAGCCT CCGGCACCGG GCGTGAAGGC
GGTGAGTACA GCTTCGAAGT GTTCGCGGAA ATGAAGAACG TCTGCATTTC CATGGGCGAC
CATCCAATTC CGAAATGGGG AGTCTGA
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| Protein sequence | MKKVNHWING KNVAGNDYFQ TTNPATGEVL ADVASGGEAE INQAVAAAKE AFPKWANLPM
KERARLMRRL GDLIDQNVPE IAAMETADTG LPIHQTKNVL IPRASHNFEF FAEVCQQMNG
KTYPVDDKML NYTLVQPVGV CALVSPWNVP FMTATWKVAP CLALGNTAVL KMSELSPLTA
DRLGELALEA GIPAGVLNVV QGYGATAGDA LVRHHDVRAV SFTGGTATGR NIMKNAGLKK
YSMELGGKSP VLIFEDADIE RALDAALFTI FSINGERCTA GSRIFIQQSI YPEFVKRFAE
RANRLRVGDP NDPNTQVGAL ISQQHWEKVS GYIRLGIEEG ATLLAGGPDK PSDLPAHLKG
GNFLRPTVLA DVDNRMRVAQ EEIFGPVACL LPFKDEAEGL RLANDVEYGL ASYIWTQDVS
KVLRLARGIE AGMVFVNTQN VRDLRQPFGG VKASGTGREG GEYSFEVFAE MKNVCISMGD
HPIPKWGV
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