| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4880 |
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| Symbol | |
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| ID | 6272859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 4550832 |
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| End bp | 4552997 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641728615 |
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| Product | carbon starvation family protein |
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| Protein accession | YP_001883009 |
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| Protein GI | 187732208 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.469021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGGTT TTACTATGGA TACGAAAAAA CTATTCAAGC ACATACCCTG GGTGATTCTC
GGAATCATCG GTGCATTCTG CCTCGCGGTA GTTGCATTAC GTCGGGGGGA GCACGTCAGC
GCCCTGTGGA TCGTGGTCGC CTCTGTGTCG GTGTATCTGG TGGCGTATCG CTACTACAGT
CTGTACATCG CCCAGAAGGT GATGAAACTC GACCCCACGC GCGCGACGCC TGCGGTTATT
AACAACGACG GTCTGAACTA CGTTCCGACC AACCGTTACG TGTTGTTTGG TCACCACTTC
GCCGCTATCG CTGGTGCCGG TCCGCTGGTT GGTCCGGTGC TCGCCGCGCA GATGGGCTAC
CTGCCTGGCA CGCTGTGGCT GCTGGCGGGG GTAGTACTGG CCGGTGCGGT TCAGGACTTT
ATGGTGCTGT TTATCTCCTC TCGCCGTAAC GGCGCATCTC TCGGTGAGAT GATCAAAGAA
GAGATGGGAC CAGTACCGGG GACTATCGCG CTGTTTGGCT GTTTCTTAAT CATGATCATC
ATCCTCGCCG TTCTGGCGCT GATTGTGGTT AAAGCCCTGG CCGAAAGTCC GTGGGGTGTC
TTCACCGTTT GCTCAACCGT ACCGATTGCG CTGTTTATGG GTATCTACAT GCGCTTTATC
CGTCCGGGGC GTGTAGGTGA AGTTTCTGTT ATTGGTATCG TGCTGCTGGT TGCCTCTATC
TATTTCGGTG GCGTGATTGC TCACGATCCG TACTGGGGTC CGGCACTGAC CTTTAAAGAC
ACCACCATTA CCTTCGCGCT GATTGGCTAT GCGTTTGTTT CCGCACTGCT GCCGGTGTGG
CTGATCCTCG CACCGCGCGA CTATCTGGCA ACCTTCCTGA AAATCGGCGT TATCGTCGGC
CTGGCGCTGG GTATCGTGGT ACTGAACCCG GAACTGAAAA TGCCTGCAAT GACCCAGTAC
ATTGACGGTA CTGGCCCGCT GTGGAAAGGC GCTCTGTTCC CGTTCCTGTT CATCACCATC
GCCTGTGGTG CGGTATCTGG CTTCCACGCG CTGATCTCTT CCGGTACGAC GCCGAAATTG
CTGGCTAACG AAACCGACGC GCGTTTCATT GGCTACGGCG CAATGCTGAT GGAATCCTTC
GTGGCGATTA TGGCGCTGGT TGCTGCGTCC ATCATCGAAC CGGGTCTTTA CTTCGCGATG
AATACCCCGC CTGCTGGCCT TGGCATCACC ATGCCTAACC TGCATGAAAT GGGTGGCGAG
AACGCGCCGA TCATCATGGC GCAGCTGAAA GACGTTACCG CACACGCGGC GGCGACCGTC
AGCTCCTGGG GCTTCGTGAT TTCGCCAGAG CAGATCCTGC AAACCGCGAA AGACATTGGT
GAGCCTTCTG TCCTGAACCG TGCAGGTGGC GCGCCGACGC TGGCGGTAGG TATCGCTCAC
GTGTTCCACA AAGTGCTGCC GATGGCTGAC ATGGGCTTCT GGTATCACTT CGGTATTCTG
TTCGAAGCCC TGTTCATCCT GACCGCGCTG GATGCGGGTA CTCGTTCTGG CCGCTTTATG
CTGCAAGACC TGCTGGGTAA CTTCATCCCG TTCCTGAAAA AAACCGACTC TCTGGTTGCC
GGTATCATCG GTACTGCGGG CTGTGTGGGT CTGTGGGGCT ACCTGCTGTA TCAGGGCGTG
GTCGATCCGC TGGGCGGCGT TAAGAGCCTG TGGCCGCTGT TCGGTATTTC CAACCAGATG
CTGGCAGCCG TAGCGCTGGT ACTGGGCACC GTTGTGCTGA TTAAGATGAA GCGCACCCAA
TACATCTGGG TAACTGTTGT TCCGGCTGTA TGGCTGCTTA TCTGCACCAC CTGGGCGCTG
GGTCTGAAAC TGTTCAGCAC CAACCCGCAG ATGGAAGGCT TCTTCTACAT GGCAAGCCAG
TACAAAGAGA AGATTGCTAA CGGTACTGAC CTGACGGCGC AGCAGATTGC CAACATGAAC
CACATCGTTG TGAACAACTA CACCAACGCA GGCCTGAGTA TTCTGTTCCT GATTGTGGTG
TACAGCATCA TCTTCTACGG TTTCAAAACC TGGCTTGCGG TGCGTAACAG CGACAAACGT
ACTGACAAAG AAACTCCGTA CGTTCCAATC CCGGAAGGCG GCGTGAAGAT CTCTTCGCAC
CACTAA
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| Protein sequence | MPGFTMDTKK LFKHIPWVIL GIIGAFCLAV VALRRGEHVS ALWIVVASVS VYLVAYRYYS
LYIAQKVMKL DPTRATPAVI NNDGLNYVPT NRYVLFGHHF AAIAGAGPLV GPVLAAQMGY
LPGTLWLLAG VVLAGAVQDF MVLFISSRRN GASLGEMIKE EMGPVPGTIA LFGCFLIMII
ILAVLALIVV KALAESPWGV FTVCSTVPIA LFMGIYMRFI RPGRVGEVSV IGIVLLVASI
YFGGVIAHDP YWGPALTFKD TTITFALIGY AFVSALLPVW LILAPRDYLA TFLKIGVIVG
LALGIVVLNP ELKMPAMTQY IDGTGPLWKG ALFPFLFITI ACGAVSGFHA LISSGTTPKL
LANETDARFI GYGAMLMESF VAIMALVAAS IIEPGLYFAM NTPPAGLGIT MPNLHEMGGE
NAPIIMAQLK DVTAHAAATV SSWGFVISPE QILQTAKDIG EPSVLNRAGG APTLAVGIAH
VFHKVLPMAD MGFWYHFGIL FEALFILTAL DAGTRSGRFM LQDLLGNFIP FLKKTDSLVA
GIIGTAGCVG LWGYLLYQGV VDPLGGVKSL WPLFGISNQM LAAVALVLGT VVLIKMKRTQ
YIWVTVVPAV WLLICTTWAL GLKLFSTNPQ MEGFFYMASQ YKEKIANGTD LTAQQIANMN
HIVVNNYTNA GLSILFLIVV YSIIFYGFKT WLAVRNSDKR TDKETPYVPI PEGGVKISSH
H
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