Gene SbBS512_E4876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4876 
Symbol 
ID6269117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4547133 
End bp4548329 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content58% 
IMG OID641728611 
Producttransposase 
Protein accessionYP_001883005 
Protein GI187730873 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAT CCAGCGATTA CGAATCCGTC CAGGTCTTTA TCGGCGTTGA TGTCGGTAAA 
GATACGCATC ACGCTGTTGC CATTAATCGT TCAGGTAAAC GCCTGTTCGA TAAAGCATTA
CCCAACGACG AAAACAAACT CAGGTCGCTA ATATCTGACC TGAAACAACA TGGTCAGATA
CTGCTGGTTG TTGATCAGCC AGCTACCATC GGTGCGTTAC CTGTCGCCGT TGCCCGCTCA
GAAGGAGTCC TTGTCGGATA CCTCCCTGGA CTGGCCATGC GCCGCATAGC CGACTTACAC
GCCGGTGAAG CTAAAACTGA TGCTCGTGAC GCTGCCATCA TTGCCGAAGC TGCCCGTACC
CTGCCTCACG CGCTACGCAC GCTGAAACTG GCTGACGAGC AAATCGCCGA ACTCTCCATG
CTCTGCGGCT TCGATGATGA TCTTGCCGCA CAGACAACGC AGGCCAGCAA CCGTATCCGC
GGCCTTCTGA CCCAGATACA TCCGGCACTG GAGCGCGTTC TCGGTCCGAG ACTTGAGCAC
CCGGCGGTAC TCGATCTTCT CCAGCGATAT CCCTCACCAG AAAAACTCGC TTCGCTGGGT
GAGAAGAAGC TGGCAGCCCA GCTCTGCAAA CTTGCGCCTC GTCTGGGTAA ACGCCTTGCA
GCAGACATAG CTCAGGCACT GGCCGAACAA ACCGTCGTCG TTCCCGGCAC GAATGCCGCT
GCCGTAGTAC TGCCACGTCT GGCACTCCAG CTCATCACGC TGCGTAAGCA AAGAGACGAG
GTGGCGCTTG AGGTAGAACA GCGAGTTCTT GCTCACCCTC TTTACCCGGT CCTGACCAGT
ATGCCCGGAG TCGGTGTCAG GACCGCAGCC AGACTCCTCA CCGAGGTCGC CTGCCGCGCC
TTCGCCTCTG CCGCACATCT CGCTGCTTAT GCTGGCCTTG CGCCGGTAAC TCGGCGATCC
GGCTCGTCAA TACGCGGTGA GCATCCCTCG CGACGGGGTA ATAAAGCTCT CAAACGGGCG
TTGTTCCTGT CGGCCTTCGC CGCGCTCAGG GATCCGCTCT CCAGGGCTTA CTACACCCGC
AAAATGAGTC AGGGAAAACG ACACAATCAG GCGCTTATCG CCCTGGCGAG ACGACGCTGC
GACGTTCTGT TCGCCATGAT GCGCGACGGG ACTTTTTATA CCCCGCAGGG GTCATAA
 
Protein sequence
MTESSDYESV QVFIGVDVGK DTHHAVAINR SGKRLFDKAL PNDENKLRSL ISDLKQHGQI 
LLVVDQPATI GALPVAVARS EGVLVGYLPG LAMRRIADLH AGEAKTDARD AAIIAEAART
LPHALRTLKL ADEQIAELSM LCGFDDDLAA QTTQASNRIR GLLTQIHPAL ERVLGPRLEH
PAVLDLLQRY PSPEKLASLG EKKLAAQLCK LAPRLGKRLA ADIAQALAEQ TVVVPGTNAA
AVVLPRLALQ LITLRKQRDE VALEVEQRVL AHPLYPVLTS MPGVGVRTAA RLLTEVACRA
FASAAHLAAY AGLAPVTRRS GSSIRGEHPS RRGNKALKRA LFLSAFAALR DPLSRAYYTR
KMSQGKRHNQ ALIALARRRC DVLFAMMRDG TFYTPQGS