| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4846 |
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| Symbol | nrdD |
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| ID | 6271756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4517024 |
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| End bp | 4519162 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641728584 |
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| Product | anaerobic ribonucleoside triphosphate reductase |
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| Protein accession | YP_001882978 |
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| Protein GI | 187731109 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.758929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGC ATGTGATGAA ACGAGACGGC TGCAAAGTGC CGTTTAAATC AGAGCGCATC
AAAGAAGCGA TTCTGCGTGC AGCTAAAGCA GCGGAAGTCG ATGATGCCGA TTATTGCGCC
ACTGTTGCTG CAGTTGTCAG CGAGCAGATG CAGGGCCGCA ACCAGGTGGA TATCAATGAG
ATCCAGACCG CTGTTGAAAA CCAGCTGATG TCAGGTCCAT ACAAACAACT GGCTCGTGCT
TACATCGAGT ACCGTCACGA TCGCGACATT GAACGTGAAA AACGCGGTCG CCTGAATCAG
GAGATCCGTG GTCTGGTCGA GCAGACCAAC GCCTCGTTAC TCAACGAAAA CGCCAACAAA
GACAGCAAGG TGATTCCAAC CCAGCGCGAC CTGCTGGCCG GGATCGTGGC TAAACACTAT
GCACGTCAGC ACCTGCTGCC GCGTGACGTG GTGCAGGCAC ATGAGCGTGG CGATATTCAC
TATCACGATC TCGATTACTC GCCGTTCTTC CCGATGTTCA ACTGCATGTT GATCGACCTG
AAAGGCATGC TGACCCAGGG CTTTAAGATG GGGAACGCCG AGATTGAACC GCCGAAGTCG
ATCTCTACGG CAACCGCTGT AACTGCGCAG ATTATTGCTC AGGTCGCCAG CCATATTTAT
GGCGGCACCA CCATTAACCG TATCGATGAA GTGCTGGCAC CGTTTGTCAC CGCCAGCTAC
AACAAACATC GCAAGACCGC AGAAGAGTGG AACATCCCGG ACGCCGAAGG CTACGCTAAC
TCTCGTACCA TTAAAGAGTG CTACGATGCC TTCCAGTCGC TGGAGTACGA AGTAAACACC
CTGCACACCG CCAACGGTCA GACGCCGTTT GTAACCTTTG GTTTTGGTCT GGGCACCAGC
TGGGAGTCGC GCCTGATTCA GGAATCTATC CTGCGTAACC GTATCGCAGG CCTCGGTAAA
AACCGTAAAA CTGCGGTGTT CCCGAAACTG GTGTTTGTGA TTCGCGATGG CCTGAACCAT
AAAAAAGGCG ATCCGAACTA CGACATCAAA CAGCTGGCGC TGGAGTGCGC AAGCAAGCGC
ATGTATCCGG ATATCCTGAA CTACGATCAG GTAGTGAAAG TCACCGGTTC GTTTAAAACT
CCGATGGGCT GCCGCAGCTT CCTCGGCGTG TGGGAAAATG AAAACGGCGA GCAGATCCAC
GATGGTCGTA ACAACCTCGG CGTGATCAGC CTGAACCTGC CGCGTATTGC TCTGGAAGCA
AAAGGCGATG AAGCCACCTT CTGGAAGCTG CTGGATGAAC GTCTGGTGCT GGCACGTAAG
GCGCTGATGA CCCGTATCGC TCGTCTCGAA GGCGTGAAAG CGCGCGTGGC CCCGATCCTC
TATATGGAAG GTGCTTGTGG CGTGCGTCTC AATGCTGACG ATGATGTTTC TGAAATCTTC
AAAAACGGTC GTGCGTCTCT TTCGCTGGGT TACATCGGCA TCCACGAAAC CATTAACGCG
CTGTTCGGCG GCGAGCATGT TTACGACAAC GAGCAGCTTC GCGCGAAAGG TATCGCCATT
GTTGAACGTC TGCGTCAGGC AGTGGATCAG TGGAAGGAAG AAACGGGTTA TGGTTTCAGT
CTCTACAGCA CGCCGAGTGA AAACCTGTGC GACCGCTTCT GCCGTCTCGA TACTGCTGAG
TTTGGCGTGG TGCCGGGCGT GACCGATAAA GGTTACTACA CCAACAGTTT CCACCTCGAT
GTGGAGAAGA AGGTGAACCC GTACGACAAG ATCGACTTTG AAGCGCCTTA CCCGCCGCTG
GCGAACGGTG GTTTCATTTG CTACGGCGAG TATCCAAACA TTCAGCACAA CCTGAAGGCG
CTGGAAGATG TCTGGGATTA CAGCTATCAG CATGTACCGT ATTACGGCAC CAATACACCG
ATTGATGAGT GCTACGAGTG TGGCTTTACC GGTGAGTTCG AGTGCACCAG CAAAGGCTTC
ACCTGCCCGA AATGTGGTAA CCATGACGCC TCCCGTGTGT CGGTAACTCG CCGCGTGTGC
GGATATTTAG GTAGCCCGGA TGCACGTCCG TTTAACGCCG GCAAGCAGGA AGAAGTTAAG
CGCCGCGTTA AACATTTGGG AAATGGGCAG ATAGGTTGA
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| Protein sequence | MTPHVMKRDG CKVPFKSERI KEAILRAAKA AEVDDADYCA TVAAVVSEQM QGRNQVDINE
IQTAVENQLM SGPYKQLARA YIEYRHDRDI EREKRGRLNQ EIRGLVEQTN ASLLNENANK
DSKVIPTQRD LLAGIVAKHY ARQHLLPRDV VQAHERGDIH YHDLDYSPFF PMFNCMLIDL
KGMLTQGFKM GNAEIEPPKS ISTATAVTAQ IIAQVASHIY GGTTINRIDE VLAPFVTASY
NKHRKTAEEW NIPDAEGYAN SRTIKECYDA FQSLEYEVNT LHTANGQTPF VTFGFGLGTS
WESRLIQESI LRNRIAGLGK NRKTAVFPKL VFVIRDGLNH KKGDPNYDIK QLALECASKR
MYPDILNYDQ VVKVTGSFKT PMGCRSFLGV WENENGEQIH DGRNNLGVIS LNLPRIALEA
KGDEATFWKL LDERLVLARK ALMTRIARLE GVKARVAPIL YMEGACGVRL NADDDVSEIF
KNGRASLSLG YIGIHETINA LFGGEHVYDN EQLRAKGIAI VERLRQAVDQ WKEETGYGFS
LYSTPSENLC DRFCRLDTAE FGVVPGVTDK GYYTNSFHLD VEKKVNPYDK IDFEAPYPPL
ANGGFICYGE YPNIQHNLKA LEDVWDYSYQ HVPYYGTNTP IDECYECGFT GEFECTSKGF
TCPKCGNHDA SRVSVTRRVC GYLGSPDARP FNAGKQEEVK RRVKHLGNGQ IG
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