Gene SbBS512_E4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4843 
SymboltreB 
ID6270384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4513507 
End bp4514925 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content55% 
IMG OID641728581 
ProductPTS system trehalose(maltose)-specific transporter subunits IIBC 
Protein accessionYP_001882975 
Protein GI187733689 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01992] PTS system, trehalose-specific IIBC component 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAA TAAACCAAAC GGATATCGAT CGGTTGATTG AACTGGTCGG CGGGCGCGGC 
AATATTGCGA CGGTGAGCCA CTGTATTACT CGCCTACGCT TTGTCCTCAA CCAACCGGCC
AATGCCAGAC CGAAAGAAAT TGAGCAACTC CCCATGGTGA AAGGCTGTTT CACCAATGCC
GGGCAATTTC AGGTGGTGAT TGGCACCAAC GTGGGTGACT ACTATCAAGC ACTGATAGCG
TCAACCGGAC AGGCGCAGGT TGATAAAGAG CAGGTAAAAA AAGCCGCCCG GCAGAATATG
AAATGGCATG AGCAGTTGAT CTCTCATTTC GCAGAGACCT TCTTCCCGTT GCTGCCCGCG
TTGATTAGCG GCGGTTTGAT CCTCGGTTTT CGCAATGTGA TCGGCGATTT GCCCATGAGC
AACGGTCAAA CGCTGGCGCA AATGTACCCT TCCCTGCAAA CGATCTACGA TTTTCTGTGG
TTGATCGGTG AAGCGATCTT CTTCTACCTG CCGGTCGGGA TTTGCTGGTC AGCGGTGAAA
AAAATGGGCG GCACACCGAT CCTTGGTATC GTGCTTGGCG TGACACTGGT TTCCCCCCAA
CTGATGAACG CTTATCTGCT CGGGCAGCAG CTGCCGGAAG TGTGGGACTT TGGCATGTTC
AGCATCGCCA AAGTGGGCTA TCAGGCGCAG GTGATCCCGG CACTGTTAGC CGGGCTGGCG
CTGGGCGTTA TTGAAACTCG CCTTAAACGC ATCGTGCCAG ATTACCTCTA TCTGGTGGTG
GTGCCCGTCT GTTCGCTGAT CCTCGCGGTG TTCCTCGCCC ATGCGCTGAT TGGTCCGTTT
GGTCGCATGA TTGGCGATGG CGTTGCCTTT GCGGTACATC ACCTGATGAC CGGCAGCTTT
GCTCCGATTG GCGCGGCATT GTTTGGCTTC CTGTACGCCC CGCTGGTGAT CACCGGGGTA
CACCAGACCA CGCTTGCTAT TGATTTGCAG ATGATTCAAA GCATGGGTGG TACGCCAGTG
TGGCCACTGA TTGCGCTGTC GAATATCGCT CAGGGCTCCG CCGTGATCGG CATTATCATT
TCCAGCCGCA AGCACAATGA ACGCGAGATC TCCGTGCCTG CGGCGATCTC CGCCTGGCTT
GGGGTCACTG AGCCTGCAAT GTACGGCATC AACCTGAAAT ATCGCTTCCC GATGCTGTGC
GCGATGATTG GTTCTGGTCT GGCAGGATTG CTATGCGGCC TGAACGGCGT TATGGCGAAT
GGCATCGGCG TAGGCGGCCT GCCGGGAATT CTCTCGATTC AACCGAACTA CTGGCAGGTG
TTTGCGCTGG CAATGGCTAT CGCCATCATC ATCCCGATTG TACTCACCTC GTTTATCTAT
CAGCGGAAAT ACCGCCTGGG CACGCTGGAC ATTGTTTAA
 
Protein sequence
MSKINQTDID RLIELVGGRG NIATVSHCIT RLRFVLNQPA NARPKEIEQL PMVKGCFTNA 
GQFQVVIGTN VGDYYQALIA STGQAQVDKE QVKKAARQNM KWHEQLISHF AETFFPLLPA
LISGGLILGF RNVIGDLPMS NGQTLAQMYP SLQTIYDFLW LIGEAIFFYL PVGICWSAVK
KMGGTPILGI VLGVTLVSPQ LMNAYLLGQQ LPEVWDFGMF SIAKVGYQAQ VIPALLAGLA
LGVIETRLKR IVPDYLYLVV VPVCSLILAV FLAHALIGPF GRMIGDGVAF AVHHLMTGSF
APIGAALFGF LYAPLVITGV HQTTLAIDLQ MIQSMGGTPV WPLIALSNIA QGSAVIGIII
SSRKHNEREI SVPAAISAWL GVTEPAMYGI NLKYRFPMLC AMIGSGLAGL LCGLNGVMAN
GIGVGGLPGI LSIQPNYWQV FALAMAIAII IPIVLTSFIY QRKYRLGTLD IV