Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4843 |
Symbol | treB |
ID | 6270384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4513507 |
End bp | 4514925 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641728581 |
Product | PTS system trehalose(maltose)-specific transporter subunits IIBC |
Protein accession | YP_001882975 |
Protein GI | 187733689 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component [TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component [TIGR01992] PTS system, trehalose-specific IIBC component |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA TAAACCAAAC GGATATCGAT CGGTTGATTG AACTGGTCGG CGGGCGCGGC AATATTGCGA CGGTGAGCCA CTGTATTACT CGCCTACGCT TTGTCCTCAA CCAACCGGCC AATGCCAGAC CGAAAGAAAT TGAGCAACTC CCCATGGTGA AAGGCTGTTT CACCAATGCC GGGCAATTTC AGGTGGTGAT TGGCACCAAC GTGGGTGACT ACTATCAAGC ACTGATAGCG TCAACCGGAC AGGCGCAGGT TGATAAAGAG CAGGTAAAAA AAGCCGCCCG GCAGAATATG AAATGGCATG AGCAGTTGAT CTCTCATTTC GCAGAGACCT TCTTCCCGTT GCTGCCCGCG TTGATTAGCG GCGGTTTGAT CCTCGGTTTT CGCAATGTGA TCGGCGATTT GCCCATGAGC AACGGTCAAA CGCTGGCGCA AATGTACCCT TCCCTGCAAA CGATCTACGA TTTTCTGTGG TTGATCGGTG AAGCGATCTT CTTCTACCTG CCGGTCGGGA TTTGCTGGTC AGCGGTGAAA AAAATGGGCG GCACACCGAT CCTTGGTATC GTGCTTGGCG TGACACTGGT TTCCCCCCAA CTGATGAACG CTTATCTGCT CGGGCAGCAG CTGCCGGAAG TGTGGGACTT TGGCATGTTC AGCATCGCCA AAGTGGGCTA TCAGGCGCAG GTGATCCCGG CACTGTTAGC CGGGCTGGCG CTGGGCGTTA TTGAAACTCG CCTTAAACGC ATCGTGCCAG ATTACCTCTA TCTGGTGGTG GTGCCCGTCT GTTCGCTGAT CCTCGCGGTG TTCCTCGCCC ATGCGCTGAT TGGTCCGTTT GGTCGCATGA TTGGCGATGG CGTTGCCTTT GCGGTACATC ACCTGATGAC CGGCAGCTTT GCTCCGATTG GCGCGGCATT GTTTGGCTTC CTGTACGCCC CGCTGGTGAT CACCGGGGTA CACCAGACCA CGCTTGCTAT TGATTTGCAG ATGATTCAAA GCATGGGTGG TACGCCAGTG TGGCCACTGA TTGCGCTGTC GAATATCGCT CAGGGCTCCG CCGTGATCGG CATTATCATT TCCAGCCGCA AGCACAATGA ACGCGAGATC TCCGTGCCTG CGGCGATCTC CGCCTGGCTT GGGGTCACTG AGCCTGCAAT GTACGGCATC AACCTGAAAT ATCGCTTCCC GATGCTGTGC GCGATGATTG GTTCTGGTCT GGCAGGATTG CTATGCGGCC TGAACGGCGT TATGGCGAAT GGCATCGGCG TAGGCGGCCT GCCGGGAATT CTCTCGATTC AACCGAACTA CTGGCAGGTG TTTGCGCTGG CAATGGCTAT CGCCATCATC ATCCCGATTG TACTCACCTC GTTTATCTAT CAGCGGAAAT ACCGCCTGGG CACGCTGGAC ATTGTTTAA
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Protein sequence | MSKINQTDID RLIELVGGRG NIATVSHCIT RLRFVLNQPA NARPKEIEQL PMVKGCFTNA GQFQVVIGTN VGDYYQALIA STGQAQVDKE QVKKAARQNM KWHEQLISHF AETFFPLLPA LISGGLILGF RNVIGDLPMS NGQTLAQMYP SLQTIYDFLW LIGEAIFFYL PVGICWSAVK KMGGTPILGI VLGVTLVSPQ LMNAYLLGQQ LPEVWDFGMF SIAKVGYQAQ VIPALLAGLA LGVIETRLKR IVPDYLYLVV VPVCSLILAV FLAHALIGPF GRMIGDGVAF AVHHLMTGSF APIGAALFGF LYAPLVITGV HQTTLAIDLQ MIQSMGGTPV WPLIALSNIA QGSAVIGIII SSRKHNEREI SVPAAISAWL GVTEPAMYGI NLKYRFPMLC AMIGSGLAGL LCGLNGVMAN GIGVGGLPGI LSIQPNYWQV FALAMAIAII IPIVLTSFIY QRKYRLGTLD IV
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