Gene SbBS512_E4834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4834 
Symbol 
ID6272843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp4504969 
End bp4505562 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content50% 
IMG OID641728572 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001882966 
Protein GI187732218 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCACTA AAAAACAATC TCGCGTTCCA GGTCGTCCCA GACGTTTCGC TCCTGAGCAG 
GCAGTCTCTG CGGCAAAAGT GCTTTTTCAC CAAAAAGGTT TCGATGCTGT CAGTGTTGCT 
GAAGTTACTG ATTATCTTGG TATTAACCCC CCGAGCCTCT ACGCGGCTTT TGGCAATAAG 
GCTGGGTTAT TTAGCCGTGT ACTCAATGAA TATGTCGGTA CGGAAGCTAT TCCGCTTGCC 
GATATTCTTC GTGATGATCG TCCGGTAGGG GAGTGCCTGG CTGAGGTATT AAAAGAAGCG 
GCGCGCAGAT ATAGCCAAAA CGGCGGCTGC GCTGGCTGTA TGGTTCTTGA AGGCATTCAT 
AGTCATGATC CACAAGCGCG TGATATTGCC GTTCAATATT ATCACGCCGC AGAAACGACC 
ATTTATGACT ATATCGCCAG GCGGCATCCA CAAAGCGCAC AATGTGTGAC TGATTTTATG 
AGTACCGTGA TGTCAGGGCT TTCTGCGAAG GCACGGGAGG GGCACTCCAT CGAACAACTC 
TGTGCAACAG CTGCACTGGC GGGGGAAGCG ATAAAAACTA TTCTCAAGGA GTGA
 
Protein sequence
MVTKKQSRVP GRPRRFAPEQ AVSAAKVLFH QKGFDAVSVA EVTDYLGINP PSLYAAFGNK 
AGLFSRVLNE YVGTEAIPLA DILRDDRPVG ECLAEVLKEA ARRYSQNGGC AGCMVLEGIH 
SHDPQARDIA VQYYHAAETT IYDYIARRHP QSAQCVTDFM STVMSGLSAK AREGHSIEQL 
CATAALAGEA IKTILKE