| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4808 |
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| Symbol | |
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| ID | 6270587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4476714 |
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| End bp | 4480127 |
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| Gene Length | 3414 bp |
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| Protein Length | 1137 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641728550 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_001882945 |
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| Protein GI | 187730438 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.564367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGT CTCTCAATTT TGAAATGTTG CGCAGCCAGT GGCCGGAACT GGCAGAACTC
GCATGTATGG CAGAGCGCTA TGTTCACTCC GATCCGGAAA GCTGCCTGGT TAAGCTGCGC
AACTACACCG AATTGATGGT GCGCTGGTTG TATCGTCAGG AGCGGTTGCC GGAAGGTATT
AAGGCTAATC TTTACGATTT AATGAACGCT GATGTCTTTA CCAGCATGAT GCCGGAAGCC
ATCATCATGA AAATGGATGC TCTGCGTATC CATGGCAACC GTGCCGCGCA CGGCGGACGT
ATCAAAGCTA AAGATACTTA CTGGCTGCTC AAAGAAGCGT ATTTGTTGGG AATTTGGCTG
TATGTTCGCT ACGCCCACGG TAATGTTGAT GACTGCCCCA AATTTACACT CCCTCCATTA
ACACAATCTT CAGGTCGTGC AGATGAAAAA CGTCTGGAAG ATGCAATCAA GGCTCAGGAT
GAAAGCCGTG AGCGCGAACT GGCGCTACAA CGCGCACTAC AGCAAGAACA GGAAAAGGCC
GAACACCTCA CTCAACGCCT GAATGAAGCC AGAGCGCGTA ACAAGCATGT TGCCGATATT
CTCTCTATTG ATGAAGCGGA AACCCGCCGT CGCCTGATTG ACTCTCGCTT ACTTGCAGCC
GACTGGAATG TAGGGGAAGA ACTTAAAAAC ACGGATCAAG TCACACAAGA ACATCCAGTC
AAAGAGCAAC CCACCACCTC TGGTGACGGT TATGCAGACT ATGTCTTGTG GGATGAGGCA
CACAAACCGT TGGCGGTGGT GGAAGCAAAA AAAACCAGCG TCAATGCCGA GCAAGGACGA
ATTCAGGCCC GGCTGTATGC AGACTGGCTG GAAAAAGAAT ACGGTCAGCG TCCGGTCATC
TTCTACACCA ACGGCTATGA TATCTGGCTG TGGGATGACC ATAAAACTCA TGGTTATCCC
CCGCGTCGGG TGTTTGGCTT CTACAGCAAG GAAAGCCTGC AATATCTTAT TCAGCAGCGT
GAAACCCGTC TGCCGCTGAA CAGAGTGCCA CACGTAAAAG ATAACGAAGG TAAGGCCGTT
GCCGGACGTT TGTACCAGCT CGAAACCATT GCCCGCGTCA GTGAACGGTT TACCAACAAG
TACCGACAAT CGTTAATTGT TCAGGCTACG GGTACAGGCA AAACCCGCGT GGCAATTGCA
CTAAGCAAAC TGATGATTGA TGCCCGCTGG GTAAAACGCG TCCTGTTTCT TTGCGACCGT
AAAGAACTGC GTAAACAGGC GGCAAATGCC TTTAATCAAT TCACCAATGA GCCGCTGTAT
GTGGTCGGGA AATCGAAAAA AGCAGACAGG CAGAATGCCA GAATCTACAT CGCTACCTAT
CCCGGTATGA TGAAAATCAT GGACCATTTC GATGTCGGTT ATTTCGATTT GATCATCGCC
GATGAATCCC ACCGCTCTAT CTACAACGTC TACGGCGATC TGTTTAAGTA TTTTGATGCC
CTCCAGATTG GCCTGACGGC CACGCCAATT GACATGGTGA GTAAAACCAC TTTCGGCCTG
TTTGGTTGTG AAGGACGTAT TCCTACCGCC AACTACAGCC TGGAAGATGC CATCGCCGAT
AACAATCTGG TTCCCTATGA GGTTGTCACA CACACAACAG AATTCCTGCG CGAAGGTATC
AAACGGGAGA AATTAAGCGA CGCACAAATC CGCGAGCTGG AAGAACAAGG CATAGATCCC
AATACGCTGG AGTTTGATGG CAAGGCGCTG GATGAGGCGA TCTACAACAA AGACACCAAC
CGCTATATCC TGCGTAACCT GATGGAAAAT GGCCTGAAAG ATCGGGACGG CCAGTTGCCT
GGTAAAACCA TCATTTTCGC CCGTAACCAC AAACACGCGC TGCTGTTGAA TGAATTGTTC
GACGATATGT ACCCACAGTT TGCCGGGCGC TTCTGCCAGG TCATCGACAA CTACGATCCC
CGCGCCGAGC AACTGATTGA TGATTTTAAA GGGCTGGATG AAAGCACCAA CAAAGAGCTG
ACCATCGCTA TCTCCGTTGA CATGCTCGAT ACCGGTATTG ATGTCCCGGA AATTGTGAAT
CTGGTCTTTG CCAAACCGGT CAAATCAAAA GTGAAGTTCT GGCAGATGAT TGGCCGTGGT
ACGCGCCTCT GTCCGGGGTT GTACGGTTAC GACGATAACG GCAAACCGCT GGATAAACAG
AAATTCCGCA TTTTCGATCA CTGGGGCAAT TTTGAGTATC ACGAGCTGCA TACCGAAGAG
GCGGAAGTCA CAGCGACAAA ATCGCTTGCG CAAAAACGCT TCGAAGCGTG GGTTATGCTG
GGGGCCGCTG CGCAGCGTAA ATTCGACAAA CAGGCGGTGG ATTTAGTTGC TCACCAGCTT
CGCGAGCAAA TCAACGCACT GGATGAAAAG TCGATTGCCG TACAGGAAAA ATGGCAGCAG
AAAGCGCAGT ACAGTGATGA AAAGGTGCTG CGCCAGCTTT CTCCGAAAAC ACAGCAGGAT
CTGCTATCTG TTCTGGCCCC GTTGATGCAG TGGCTGGACG TGCGCGGGCA AAGCGATGCC
ATACGCTTTG ATATGGATAT TCTGGCGGCG CAAACTGCCC GTTATACCAA CCCGGAAGAG
CTGGATGTTC TCTGGCCGAT CATCGTCGAA AAAGTGGAGC GCCTGCCGCC GCATTTGGCG
CAGGTGCAGC AACAGGGACA ACGAATCAAT CAGCTTCGTG ATTTAAGCTG GTGGAAGCAG
GCCAGCCTGG AAGAGCTGGA GGATATTCGC ATTCATTTGC GCGGTATCAT GCACCTGATG
GAAAAAGACG CGACGCCTAA ATTTGGTTCG ATACAGGTGG ATATTACCGA AGATGCGAAC
CTGATCCAGA CGGAGACCCG CAAAACTAAT ATCCGCTCGA TTGATTTCAA ACTCTATCGC
CAGCAGGTTC AGGGGGCGCT GGAGCCGCTG TTCCAGCAAA ACCCGGTTCT GAAGAAAATC
CGCAACGGCG AGCCAGTCAC GCAAAACGAG CTGGATGAGC TGGCGAAGCT GGTGCTGATC
CAGAACCCCA ACGTTGATAT TCGTGCGTTG AAAGAGTTTT ATCCGCAGGC AACCGCCAGC
CTGGATAAAC TTTTGCGTAC CATCATCGGG ATGGACAGCG ACGCGGTGGA AGTGCGTTTT
GCCCAGTTCG CCGCTGATAA CAGCCTGACC AGCCAACAAC TGCGCTTCCT GTCATTGCTG
AAAAACCACA TTCGCGATTA CGGCACCATT GAAATGCGGC AGCTCTTTGA ACAGCCTTTT
ACGCATATCC ACAACGAAGG CGTTACCGGT GTGTTCCCTG ATATAGCGCA AATCGCCCGC
CTGCAAAAGA TAGTCGAAGA GCTGGGTGTT GTGACCGACG CAGCGACGGT ATAA
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| Protein sequence | MEQSLNFEML RSQWPELAEL ACMAERYVHS DPESCLVKLR NYTELMVRWL YRQERLPEGI
KANLYDLMNA DVFTSMMPEA IIMKMDALRI HGNRAAHGGR IKAKDTYWLL KEAYLLGIWL
YVRYAHGNVD DCPKFTLPPL TQSSGRADEK RLEDAIKAQD ESRERELALQ RALQQEQEKA
EHLTQRLNEA RARNKHVADI LSIDEAETRR RLIDSRLLAA DWNVGEELKN TDQVTQEHPV
KEQPTTSGDG YADYVLWDEA HKPLAVVEAK KTSVNAEQGR IQARLYADWL EKEYGQRPVI
FYTNGYDIWL WDDHKTHGYP PRRVFGFYSK ESLQYLIQQR ETRLPLNRVP HVKDNEGKAV
AGRLYQLETI ARVSERFTNK YRQSLIVQAT GTGKTRVAIA LSKLMIDARW VKRVLFLCDR
KELRKQAANA FNQFTNEPLY VVGKSKKADR QNARIYIATY PGMMKIMDHF DVGYFDLIIA
DESHRSIYNV YGDLFKYFDA LQIGLTATPI DMVSKTTFGL FGCEGRIPTA NYSLEDAIAD
NNLVPYEVVT HTTEFLREGI KREKLSDAQI RELEEQGIDP NTLEFDGKAL DEAIYNKDTN
RYILRNLMEN GLKDRDGQLP GKTIIFARNH KHALLLNELF DDMYPQFAGR FCQVIDNYDP
RAEQLIDDFK GLDESTNKEL TIAISVDMLD TGIDVPEIVN LVFAKPVKSK VKFWQMIGRG
TRLCPGLYGY DDNGKPLDKQ KFRIFDHWGN FEYHELHTEE AEVTATKSLA QKRFEAWVML
GAAAQRKFDK QAVDLVAHQL REQINALDEK SIAVQEKWQQ KAQYSDEKVL RQLSPKTQQD
LLSVLAPLMQ WLDVRGQSDA IRFDMDILAA QTARYTNPEE LDVLWPIIVE KVERLPPHLA
QVQQQGQRIN QLRDLSWWKQ ASLEELEDIR IHLRGIMHLM EKDATPKFGS IQVDITEDAN
LIQTETRKTN IRSIDFKLYR QQVQGALEPL FQQNPVLKKI RNGEPVTQNE LDELAKLVLI
QNPNVDIRAL KEFYPQATAS LDKLLRTIIG MDSDAVEVRF AQFAADNSLT SQQLRFLSLL
KNHIRDYGTI EMRQLFEQPF THIHNEGVTG VFPDIAQIAR LQKIVEELGV VTDAATV
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