Gene SbBS512_E4802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4802 
Symbol 
ID6271513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4474561 
End bp4474797 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content44% 
IMG OID641728546 
Productchaperone protein FimC 
Protein accessionYP_001882941 
Protein GI187731902 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAATA AAAACGCCAA TGTAAGGAAA TCGCAGGAAA TAACATTCTG CTTGCTGGCA 
GGTATCCTGA TGTTCATGGC AATGATGGTT GCCGGACGCG CTGAAGCGGG AGTGGCCTTA
GGTGCGACTC GCGTAATTTA TCCGGCAGGG CAAAAACAAG TGCAACTTGC CGTGACAAAT
AATGATGAAA ATAGTACCTA TTTAATTCAA TCATGGGTAA TGACTCCAAC TTACTGA
 
Protein sequence
MSNKNANVRK SQEITFCLLA GILMFMAMMV AGRAEAGVAL GATRVIYPAG QKQVQLAVTN 
NDENSTYLIQ SWVMTPTY