Gene SbBS512_E4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4792 
SymboluxuA 
ID6270740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4466647 
End bp4467831 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content54% 
IMG OID641728541 
Productmannonate dehydratase 
Protein accessionYP_001882936 
Protein GI187730799 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGA CCTGGCGCTG GTACGGCCCA AACGATCTGG TTTCTTTAGC TGATGTCCGT 
CAGGCGGGCG CAACTGGCGT GGTTACCGCG CTGCACCATA TCCCGAACGG CGAAGTATGG
TCCGTAGAAG AGATCCTCAA ACGCAAGGCG ATCGTTGAAG ACGCAGGCCT GGTGTGGTCT
GTCGTAGAAA GCATACCAAT TCACGAAGAT ATCAAAACCC ACACTGGCAA CTATGAGCAG
TGGATCGCTA ACTATCAGCA GACTCTGCGC AACCTGGCGC AGTGCGGCAT TCGCACCGTG
TGCTACAACT TCATGCCGGT GCTCGACTGG ACCCGTACTG ACCTCGAATA CGTGCTGCCA
GACGGCTCCA AAGCTCTGCG CTTCGACCAG ATCGAATTCG CTGCATTCGA AATGCATATC
CTGAAACGTC CAGGCGCGGA AGCGGATTAC ACCGAAGAAG AAATTGCTCA GGCAGCTGAA
CGCTTCGCCA CTATGAGCGA TGAAGACAAA GCGCGTCTGA CGCGTAACAT CATTGCCGGT
CTGCCGGGCG CGGAAGAAGG GTATACCCTC GACCAGTTCC GTAAGCACCT GGAGCTGTAC
AAAGATATCG ATAAAGCGAA GCTGCGCGAA AACTTTGCCG TCTTCCTGAA AGCGATTATT
CCAGTTGCTG AAGAAGTTGG CGTGCGTATG GCGGTTCACC CGGACGATCC GCCGCGCCCG
ATCCTCGGCC TGCCGCGCAT TGTTTCCACC ATTGAAGATA TGCAGTGGAT GGTTGATACC
GTAAACAGCA TGGCGAACGG TTTCACCATG TGCACCGGTT CCTACGGCGT GCGTGCTGAC
AACGATCTGG TTGATATGAT CAAGCAGTTC GGTCCGCGTA TTTACTTCAC CCATCTGCGC
TCCACCATGC GTGAAGATAA CCCGAAAACC TTCCACGAAG CGGCGCACCT GAACAGTGAC
GTTGATATGT ACGAAGTGGT GAAAGCGATT GTTGAAGAAG AACACCGTCG TAAAGCGGAA
GGCAAAGAAG ACCTGATCCC GATGCGTCCG GACCACGGTC ATCAGATGCT GGACGACCTG
AAGAAGAAAA CCAACCCAGG TTACTCCGCA ATTGGTCGTC TGAAAGGCCT GGCCGAAGTT
CGCGGTGTCG AACTGGCGAT CCAGCGCGCT TTCTTTAGCC GTTAA
 
Protein sequence
MEQTWRWYGP NDLVSLADVR QAGATGVVTA LHHIPNGEVW SVEEILKRKA IVEDAGLVWS 
VVESIPIHED IKTHTGNYEQ WIANYQQTLR NLAQCGIRTV CYNFMPVLDW TRTDLEYVLP
DGSKALRFDQ IEFAAFEMHI LKRPGAEADY TEEEIAQAAE RFATMSDEDK ARLTRNIIAG
LPGAEEGYTL DQFRKHLELY KDIDKAKLRE NFAVFLKAII PVAEEVGVRM AVHPDDPPRP
ILGLPRIVST IEDMQWMVDT VNSMANGFTM CTGSYGVRAD NDLVDMIKQF GPRIYFTHLR
STMREDNPKT FHEAAHLNSD VDMYEVVKAI VEEEHRRKAE GKEDLIPMRP DHGHQMLDDL
KKKTNPGYSA IGRLKGLAEV RGVELAIQRA FFSR