Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4789 |
Symbol | |
ID | 6272113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 4464118 |
End bp | 4464891 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728538 |
Product | DNA-binding transcriptional repressor UxuR |
Protein accession | YP_001882933 |
Protein GI | 187732446 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCTG CCACCTCTGC GCAAAGACCT TACCAGGAAG TCGGGGCGAT GATCCGCGAT CTGATCATAA AGACGCCGTA CAATCCTGGC GAACGGCTGC CGCCGGAGCG TGAAATTGCA GAAATGCTTG ATGTCACGCG GACGGTGGTA CGTGAAGCGC TGATCATGCT GGAGATCAAA GGGCTGGTGG AAGTGCGCCG GGGTGCCGGT ATCTATGTTC TTGATAGCTC AGGCAGCCAC AACACAGACA GTCCGGATGC CAACGTCTGC AATGATGCCG GCCCCTTTGA ATTGTTGCAG GCGCGACAGC TTCTTGAGAG CAACATCGCG GAATTTGCCG CCCTGCAGGC TACCCGCGAA GATATCGTCA AAATGCGTCA GGCATTGCAA CTGGAAGAGC GTGAACTGGC TTCCAGCGCG CCGGGTAGCA GCGAAAGCGG TGACATGCAG TTCCATCTCG CCATTGCTGA AGCAACGCAT AACAGCATGC TGGTGGAGTT ATTCCGTCAG TCCTGGCAGT GGCGGGAAAA CAATCCAATG TGGATCCAGT TGCACAGCCA TCTGGATGAC AGCCTGTATC GCAAAGAGTG GTTGGGCGAT CACAAACAGA TCCTTGCCGC GTTAATCAAA AAAGATGCCC GAGCGGCGAA GCTGGCAATG TGGCAGCATC TGGAAAACGT TAAGCAACGT CTGCTGGAAT TCTCGAACGT TGACGATATT TATTTTGACG GCTATCTGTT TGATTCATGG CCGCTGGATA AAGTCGACGC CTGA
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Protein sequence | MKSATSAQRP YQEVGAMIRD LIIKTPYNPG ERLPPEREIA EMLDVTRTVV REALIMLEIK GLVEVRRGAG IYVLDSSGSH NTDSPDANVC NDAGPFELLQ ARQLLESNIA EFAALQATRE DIVKMRQALQ LEERELASSA PGSSESGDMQ FHLAIAEATH NSMLVELFRQ SWQWRENNPM WIQLHSHLDD SLYRKEWLGD HKQILAALIK KDARAAKLAM WQHLENVKQR LLEFSNVDDI YFDGYLFDSW PLDKVDA
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