Gene SbBS512_E4779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4779 
Symbol 
ID6272354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4458904 
End bp4459815 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content51% 
IMG OID641728530 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001882925 
Protein GI187733463 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGACT GTGGTGCGGT TTTGCATAAT ATTGAAACCA AATGGCTTTA TGATTTTCTG 
ACCCTGGAAA AATGCCGCAA TTTTTCCCAG GCGGCAGTCA GTCGTAACGT CTCGCAACCG
GCATTCAGCC GCCGCATCCG CGCGCTGGAA CAGGCGATTG GCGTTGAATT GTTTAACCGC
CAGGTGACGC CGCTGCAACT CTCAGAACAA GGGAAAATCT TCCATTCGCA GATCCGCCAT
CTGTTGCAAC AGTTAGAAAG TAACCTTGCA GAGCTGCGTG GCGGCAGCGA TTACGCGCAA
CGTAAAATCA AGATAGCCGC TGCACACTCT CTTTCCCTCG GTCTGTTACC GTCCATTATC
AGCCAGATGC CGCCGCTCTT TACCTGGGCG ATTGAAGCTA TTGATGTCGA TGAAGCAGTC
GATAAACTGC GTGAAGGGCA AAGTGACTGT ATTTTTTCCT TTCACGACGA AGATTTGCTG
GAAGCACCGT TTGACCACAT TCGCTTATTT GAATCTCAAT TGTTCCCCGT TTGCGCCAGT
GACGAATACG GAGAAGCAAT TTTTAACCTC GCGCAGCCAC ACTTTCCGTT ACTGAATTAC
AGCCGCAACT CCTATATGGG GCGATTGATT AATCGCACCC TGACGCGCCA CAGCGAGTTA
AGTTTCAGCA CCTTTTTTGT CTCTTCGATG AGCGAGCTAT TAAAGCAGGT TGCCCTCGAC
GGCTGTGGGA TTGCCTGGCT GCCGGAGTAT GCCATCCAAC AAGAAATTCG CAGCGGGCAA
CTCGTTGTGC TGAATCGGGA CGAACTGGTG ATCCCGATTC AGGCCTACGC ATACCGTATG
AATACCCGCA TGAATCCAGT TGCCGAACGC TTCTGGCGTG AACTGCGCGA GCTGGAGATT
GTGCTTAGCT GA
 
Protein sequence
MDDCGAVLHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR 
QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII
SQMPPLFTWA IEAIDVDEAV DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS
DEYGEAIFNL AQPHFPLLNY SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD
GCGIAWLPEY AIQQEIRSGQ LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI
VLS