Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4779 |
Symbol | |
ID | 6272354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4458904 |
End bp | 4459815 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641728530 |
Product | putative DNA-binding transcriptional regulator |
Protein accession | YP_001882925 |
Protein GI | 187733463 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGACT GTGGTGCGGT TTTGCATAAT ATTGAAACCA AATGGCTTTA TGATTTTCTG ACCCTGGAAA AATGCCGCAA TTTTTCCCAG GCGGCAGTCA GTCGTAACGT CTCGCAACCG GCATTCAGCC GCCGCATCCG CGCGCTGGAA CAGGCGATTG GCGTTGAATT GTTTAACCGC CAGGTGACGC CGCTGCAACT CTCAGAACAA GGGAAAATCT TCCATTCGCA GATCCGCCAT CTGTTGCAAC AGTTAGAAAG TAACCTTGCA GAGCTGCGTG GCGGCAGCGA TTACGCGCAA CGTAAAATCA AGATAGCCGC TGCACACTCT CTTTCCCTCG GTCTGTTACC GTCCATTATC AGCCAGATGC CGCCGCTCTT TACCTGGGCG ATTGAAGCTA TTGATGTCGA TGAAGCAGTC GATAAACTGC GTGAAGGGCA AAGTGACTGT ATTTTTTCCT TTCACGACGA AGATTTGCTG GAAGCACCGT TTGACCACAT TCGCTTATTT GAATCTCAAT TGTTCCCCGT TTGCGCCAGT GACGAATACG GAGAAGCAAT TTTTAACCTC GCGCAGCCAC ACTTTCCGTT ACTGAATTAC AGCCGCAACT CCTATATGGG GCGATTGATT AATCGCACCC TGACGCGCCA CAGCGAGTTA AGTTTCAGCA CCTTTTTTGT CTCTTCGATG AGCGAGCTAT TAAAGCAGGT TGCCCTCGAC GGCTGTGGGA TTGCCTGGCT GCCGGAGTAT GCCATCCAAC AAGAAATTCG CAGCGGGCAA CTCGTTGTGC TGAATCGGGA CGAACTGGTG ATCCCGATTC AGGCCTACGC ATACCGTATG AATACCCGCA TGAATCCAGT TGCCGAACGC TTCTGGCGTG AACTGCGCGA GCTGGAGATT GTGCTTAGCT GA
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Protein sequence | MDDCGAVLHN IETKWLYDFL TLEKCRNFSQ AAVSRNVSQP AFSRRIRALE QAIGVELFNR QVTPLQLSEQ GKIFHSQIRH LLQQLESNLA ELRGGSDYAQ RKIKIAAAHS LSLGLLPSII SQMPPLFTWA IEAIDVDEAV DKLREGQSDC IFSFHDEDLL EAPFDHIRLF ESQLFPVCAS DEYGEAIFNL AQPHFPLLNY SRNSYMGRLI NRTLTRHSEL SFSTFFVSSM SELLKQVALD GCGIAWLPEY AIQQEIRSGQ LVVLNRDELV IPIQAYAYRM NTRMNPVAER FWRELRELEI VLS
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