Gene SbBS512_E4773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4773 
Symbol 
ID6271169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4454582 
End bp4455760 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content53% 
IMG OID641728526 
Producttransporter, major facilitator family 
Protein accessionYP_001882921 
Protein GI187730936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTCGT CCTCGCATCC CGTAGAACGC TTTTCTTTCA GCACCGCGCT TTTCGGGATG 
CTGGTTCTGA CCCTAGGTAT GGGATTAGGT CGCTTCCTTT ATACGCCTAT GTTGCCCGTC
ATTATGGCGG AAGGGGCGTT TTCATTTAGC CAGCTCTCGT GGATTGCCAG CGGCAACTAT
GCGGGGTATC TGGCTGGCAG TCTGCTATTT TCGTTTGGCG CATTTCACCA GCCGTCGCGC
CTACGCCCAT TTCTGTTGGT TTCTGCCCTG GCGAGCGGGT TGTTGATCCT CGCAATGGCA
TGGTTGCCGC CATTTATTCT GGTGTTATTG ATTCGCTTCC TGGCGGGTGT CGCCAGCGCC
GGTATGCTGA TTTTTGGTTC GACGCTGATT ATGCAGCACA CGCGCCATCC TTTTGTGCTG
GCAGCTTTGT TTTCTGGCGT TGGCATTGGC ATTGCACTGG GCAACGAATA TGTTCTGGCA
GGCCTGCATT TTGCCTTCTC CTCGCAAACG TTATGGCAAG GCGCCGGGGC GCTTTCTGGC
ATGATGCTGA TTGCACTTAC GCTTTTAATG CCCTCGAAAA AACACGCCAT CGCACCAATG
CCATTGGCAA AAACGGAGCA ACAGATAATG AGCTGGTGGT TACTGGCTAT TCTGTACGGC
CTTGCGGGAT TTGGTTATAT CATCGTCGCG ACTTACCTGC CGCTCATGGC GAAAGATGCA
GGCTCACCAT TGTTAACCGC CCATCTCTGG ACGTTAGTCG GCTTATCAAT TGTGCCAGGC
TGCTTTGGCT GGCTATGGGC AGCAAAACGT TGGGGGGCTT TGCCTTGCCT GACGGCGAAT
TTGCTGGTGC AGGCTATCAG TGTGCTGCTT ACTCTCGCCA GCGACTCTCC TCTCTTGCTT
ATCATTAGTA GTATCGGTTT TGGCGGTACC TTTATGGGCA CGACATCTCT GGTGATGACT
ATCGCCCGCC AACTGAGCGT TCCGGGAAAT CTCAATCTTT TAGGCTTTGT GACGCTCATT
TACGGCATTG GACAAATCCT CGGCCCGGCG CTGACCAGTA TGCTCGGCAA TGGAACATCG
GCGCTTGCCG GCGCCACTCT CTGCGGCGCG GCGGCGTTGT TTATTGCTGC GCTTATCAGC
ACAGTACAAT TATTTAAGCT GCAAGTGGTC ACTTCATGA
 
Protein sequence
MPSSSHPVER FSFSTALFGM LVLTLGMGLG RFLYTPMLPV IMAEGAFSFS QLSWIASGNY 
AGYLAGSLLF SFGAFHQPSR LRPFLLVSAL ASGLLILAMA WLPPFILVLL IRFLAGVASA
GMLIFGSTLI MQHTRHPFVL AALFSGVGIG IALGNEYVLA GLHFAFSSQT LWQGAGALSG
MMLIALTLLM PSKKHAIAPM PLAKTEQQIM SWWLLAILYG LAGFGYIIVA TYLPLMAKDA
GSPLLTAHLW TLVGLSIVPG CFGWLWAAKR WGALPCLTAN LLVQAISVLL TLASDSPLLL
IISSIGFGGT FMGTTSLVMT IARQLSVPGN LNLLGFVTLI YGIGQILGPA LTSMLGNGTS
ALAGATLCGA AALFIAALIS TVQLFKLQVV TS