Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4745 |
Symbol | |
ID | 6272542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 4429327 |
End bp | 4430118 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728503 |
Product | 3-ketoacyl-(acyl-carrier-protein) reductase |
Protein accession | YP_001882898 |
Protein GI | 187732712 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000712293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCA CTCGTCCTGT TGCCGTGATT ACCGGAGCCG CTCGCGGTAT TGGAAAGGGC TGTGCGCAGG AGCTTGCTCG TGGCGGGTTT AACCTGCTGA TTAACGATCG TCCCGATGCC GACAGCGTAG AAAAACTGCA TATCACACAA CAAGAATGTT TGGCGGAAGG CGTGGAAGTG ATTTGCTTCC CTGCTGATGT CGGTGATCTA TCTCTGCATG AGGAGATGCT CGACGCGGCG CAAAACCAGT GGGGGCGGCT GGAGTGTCTG CTCAATAACG CGGGGATTTC AGTGAAAAAA CGCGGTGACC TCCTCGACCT CGAACCAGAC AGCTTCGATC AAAACATTGC CATTAACACC CGCGCGCCGT TCTTCCTTGC TCAGGCATTC AGTAAGCGCT TACTGGCACA GCCGAAACCG GAAGCGGAGC TGCCGCACCG CTCGATTATT TTCGTCAGTT CCATCAACGC CATCATGCTG GCGATGAATC GCGGCGAATA CACCATTGCC AAAACCGCCG TTTCTGCCGC TGCTCGTCTG TTTGCTGCTC GCCTTTGTAA TGAACAAATT GGCGTTTATG AAGTGCGCCC TGGTCTCATC AAAACTGATA TGACTATTCC GGCAACGGCT TATTACGACG AACTGATTGC CAAAGGTCTG GTGCCGTGGG GACGTTGGGG TTATCCGGCT GATATTGCTT CCACCGTCCG CGCAATGGCG GAAGGTAAAC TGATTTACAC CTGTGGTCAG GCGGTCGCCA TCGACGGCGG CTTAAGTATG CCGCGCTTCT GA
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Protein sequence | MKSTRPVAVI TGAARGIGKG CAQELARGGF NLLINDRPDA DSVEKLHITQ QECLAEGVEV ICFPADVGDL SLHEEMLDAA QNQWGRLECL LNNAGISVKK RGDLLDLEPD SFDQNIAINT RAPFFLAQAF SKRLLAQPKP EAELPHRSII FVSSINAIML AMNRGEYTIA KTAVSAAARL FAARLCNEQI GVYEVRPGLI KTDMTIPATA YYDELIAKGL VPWGRWGYPA DIASTVRAMA EGKLIYTCGQ AVAIDGGLSM PRF
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