Gene SbBS512_E4745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4745 
Symbol 
ID6272542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4429327 
End bp4430118 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content54% 
IMG OID641728503 
Product3-ketoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001882898 
Protein GI187732712 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000712293 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCCA CTCGTCCTGT TGCCGTGATT ACCGGAGCCG CTCGCGGTAT TGGAAAGGGC 
TGTGCGCAGG AGCTTGCTCG TGGCGGGTTT AACCTGCTGA TTAACGATCG TCCCGATGCC
GACAGCGTAG AAAAACTGCA TATCACACAA CAAGAATGTT TGGCGGAAGG CGTGGAAGTG
ATTTGCTTCC CTGCTGATGT CGGTGATCTA TCTCTGCATG AGGAGATGCT CGACGCGGCG
CAAAACCAGT GGGGGCGGCT GGAGTGTCTG CTCAATAACG CGGGGATTTC AGTGAAAAAA
CGCGGTGACC TCCTCGACCT CGAACCAGAC AGCTTCGATC AAAACATTGC CATTAACACC
CGCGCGCCGT TCTTCCTTGC TCAGGCATTC AGTAAGCGCT TACTGGCACA GCCGAAACCG
GAAGCGGAGC TGCCGCACCG CTCGATTATT TTCGTCAGTT CCATCAACGC CATCATGCTG
GCGATGAATC GCGGCGAATA CACCATTGCC AAAACCGCCG TTTCTGCCGC TGCTCGTCTG
TTTGCTGCTC GCCTTTGTAA TGAACAAATT GGCGTTTATG AAGTGCGCCC TGGTCTCATC
AAAACTGATA TGACTATTCC GGCAACGGCT TATTACGACG AACTGATTGC CAAAGGTCTG
GTGCCGTGGG GACGTTGGGG TTATCCGGCT GATATTGCTT CCACCGTCCG CGCAATGGCG
GAAGGTAAAC TGATTTACAC CTGTGGTCAG GCGGTCGCCA TCGACGGCGG CTTAAGTATG
CCGCGCTTCT GA
 
Protein sequence
MKSTRPVAVI TGAARGIGKG CAQELARGGF NLLINDRPDA DSVEKLHITQ QECLAEGVEV 
ICFPADVGDL SLHEEMLDAA QNQWGRLECL LNNAGISVKK RGDLLDLEPD SFDQNIAINT
RAPFFLAQAF SKRLLAQPKP EAELPHRSII FVSSINAIML AMNRGEYTIA KTAVSAAARL
FAARLCNEQI GVYEVRPGLI KTDMTIPATA YYDELIAKGL VPWGRWGYPA DIASTVRAMA
EGKLIYTCGQ AVAIDGGLSM PRF