Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4704 |
Symbol | hflX |
ID | 6272891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4396222 |
End bp | 4397502 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728469 |
Product | putative GTPase HflX |
Protein accession | YP_001882864 |
Protein GI | 187731219 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTTGACC GTTATGATGC TGGTGAGCAG GCGGTACTGG TACACATCTA TTTTACGAAA GACAAAGATA TGGAAGACCT CCAGGAGTTT GAATCTCTGG TTTCTTCCGC CGGTGTCGAA GCATTGCAGG TGATTACCGG TAGCCGTAAA GCGCCGCACC CAAAGTATTT TGTAGGTGAA GGTAAAGCAG TTGAAATTGC GGAAGCTGTC AAAGCGACGG GTGCTTCGGT CGTTCTTTTT GACCATGCCC TGAGCCCGGC GCAAGAGCGT AACCTGGAGC GTTTGTGCGA GTGTCGAGTC ATCGACCGCA CCGGCCTTAT TTTAGATATT TTCGCCCAAC GTGCGCGTAC CCATGAGGGT AAGTTGCAGG TTGAGCTGGC GCAGCTGCGC CATCTGGCTA CGCGCCTGGT GCGTGGCTGG ACCCACCTTG AAAGACAGAA AGGCGGGATA GGTTTGCGTG GTCCGGGTGA AACCCAGCTC GAAACCGACC GTCGTTTGTT GCGTAATCGC ATCGTGCAGA TACAGTCGCG CCTGGAAAGA GTTGAAAAGC AGCGTGAGCA GGGGCGGCAA TCGCGTATCA AAGCCGACGT TCCTACTGTT TCGCTGGTGG GATATACCAA CGCCGGTAAA TCTACCCTTT TCAATCGCAT CACCGAAGCG CGGGTCTACG CGGCAGACCA GTTGTTTGCC ACCCTCGACC CGACGTTGCG GCGTATTGAC GTCGCGGATG TCGGTGAAAC CGTACTTGCA GATACCGTAG GGTTTATTCG CCATCTGCCG CACGATCTGG TGGCGGCATT TAAAGCCACG TTACAAGAGA CGCGGCAAGC CACATTACTG CTGCACGTCA TTGATGCGGC GGATGTGCGT GTACAAGAAA ACATCGAAGC GGTGAATACG GTTCTTGAAG AGATCGACGC TCACGAGATC CCAACCCTGC TGGTGATGAA CAAGATCGAT ATGCTGGAAG ATTTCGAACC GCGTATTGAT CGGGACGAAG AGAACAAACC GATCCGTGTC TGGCTTTCCG CACAGACCGG AGCGGGGATA CCACAGCTTT TTCAGGCTTT GACGGAGCGG CTTTCCGGCG AGGTGGCGCA GCATACATTG CGTCTGCCAC CGCAGGAAGG GCGTCTGAGA AGTCGTTTTT ATCAGCTTCA GGCAATAGAA AAAGAGTGGA TGGAGGAGGA CGGCAGCGTA AGTCTGCAAG TTCGTATGCC GATCGTTGAC TGGCGTCGCC TCTGTAAACA AGAACCGGCG TTGATCGATT ACCTGATCTA A
|
Protein sequence | MFDRYDAGEQ AVLVHIYFTK DKDMEDLQEF ESLVSSAGVE ALQVITGSRK APHPKYFVGE GKAVEIAEAV KATGASVVLF DHALSPAQER NLERLCECRV IDRTGLILDI FAQRARTHEG KLQVELAQLR HLATRLVRGW THLERQKGGI GLRGPGETQL ETDRRLLRNR IVQIQSRLER VEKQREQGRQ SRIKADVPTV SLVGYTNAGK STLFNRITEA RVYAADQLFA TLDPTLRRID VADVGETVLA DTVGFIRHLP HDLVAAFKAT LQETRQATLL LHVIDAADVR VQENIEAVNT VLEEIDAHEI PTLLVMNKID MLEDFEPRID RDEENKPIRV WLSAQTGAGI PQLFQALTER LSGEVAQHTL RLPPQEGRLR SRFYQLQAIE KEWMEEDGSV SLQVRMPIVD WRRLCKQEPA LIDYLI
|
| |