Gene SbBS512_E4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E4680 
Symbolblc 
ID6269514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp4373680 
End bp4374213 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content54% 
IMG OID641728446 
Productouter membrane lipoprotein Blc 
Protein accessionYP_001882843 
Protein GI187733696 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC TCCCTCTCGT TGCCGCAGCG ACAGCTGCAT TTCTGGTCGT TGCCTGCAGT 
TCTCCTACGC CGCCGCGTGG CGTGACAGTA GTGAATAATT TCGACGCTAA ACGCTATCTC
GGTACCTGGT ATGAGATTGC CCGTTTTGAT CACCGTTTTG AACGTGGACT GGAAAAAGTC
ACCGCAACAT ACAGTCTGCG TGATGGCGGC GGCCTGAATG TCATCAATAA AGGCTATAAC
CCTGACAGAG AAATGTGGCA GCAGAGTGAA GGGAAAGCGT ACTTTACCGG CGCACCAACA
CGCGCTGCGC TGAAAGTGTC ATTCTTTGGT CCTTTCTATG GCGGTTATAA CGTCATTGCA
CTTGATCGGG AATACCGCCA TGCGCTGGTT TGCGGCCCGG ACCGCGACTA CCTGTGGATA
CTCTCCCGCA CGCCAACCAT TTCTGACGAA GTGAAACAGG AGATGCTGGC AGTCGCGACC
CGGGAAGGGT TTGATGTCAG TAAGTTTATT TGGGTACAGC AGCCCGGTAG TTAG
 
Protein sequence
MRLLPLVAAA TAAFLVVACS SPTPPRGVTV VNNFDAKRYL GTWYEIARFD HRFERGLEKV 
TATYSLRDGG GLNVINKGYN PDREMWQQSE GKAYFTGAPT RAALKVSFFG PFYGGYNVIA
LDREYRHALV CGPDRDYLWI LSRTPTISDE VKQEMLAVAT REGFDVSKFI WVQQPGS