| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E4595 |
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| Symbol | nrfE |
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| ID | 6268938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 4291451 |
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| End bp | 4293133 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641728371 |
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| Product | heme lyase subunit NrfE |
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| Protein accession | YP_001882769 |
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| Protein GI | 187731032 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGTTAA GTCTCGGGGT CAACGTGTTG ACCCCGTTGA CGGCCTTTGC GGGAGTGCGG
TTGCGCTGGC CTGCCATGAT GCGACTCACT TGCATCGGCA TTCTGGCGCA GTTCGCGCTC
CTGCTGCTCG CCTTTGGCGT ACTGACGTAT TGTTTTCTCA TCAGCGATTT CTCGGTCATT
TATGTCGCCC AACATAGCTA CAGCCTGCTG TCGTGGGAAC TCAAACTGGC GGCGGTGTGG
GGCGGTCATG AAGGTTCGCT GCTGCTTTGG GTGCTGCTGC TTTCCGCCTG GAGCGCGCTG
TTTGCCTGGC ATTATCGGCA GCAAACCGAT CCGCTATTTC CGCTGACGCT AGCCGTTTTA
TCTCTCATGC TCGCCGCACT GCTACTGTTT GTGGTGCTGT GGTCCGATCC CTTCGTGCGG
ATATTTCCAC CAGCAATCGA AGGCCGCGAT CTCAATCCGA TGCTGCAACA TCCCGGTCTT
ATCTTTCATC CACCGCTGCT TTACCTTGGC TATGGCGGTT TGATGGTAGC GGCGAGCGTG
GCGCTGGCGA GTCTACTGCG CGGCGAGTTT GATGCGGCCA GCGCCCGAAT TTGCTGGCGC
TGGGCGTTAC CTGGCTGGAG TGCATTAACG GCGGGGATCA TCCTCGGTTC CTGGTGGGCC
TACTGCGAAC TCGGCTGGGG CGGCTGGTGG TTCTGGGATC CGGTGGAAAA TGCCTCTTTA
TTACCCTGGC TTTCTGCCAC TGCGCTGCTG CACAGTTTAT CCCTGACACG CCAGCGGGGG
ATTTTTCGCC ACTGGTCGCT GTTACTGGCG ATAGTTACTC TGATGCTGTC GCTGCTGGGC
ACCTTAATTG TCCGTTCTGG CATTCTGGTT TCGGTTCATG CGTTCGCGCT GGATAACGTC
CGCGCCGTGC CGTTGTTCAG CCTGTTTGCA CTGATTAGCC TTGCGTCTCT GGCTCTGTAT
GGCTGGCGAG CGCGGGACGG TGGCCCGGCG GTGCGTTTTT CGGGGTTATC GCGGGAAATG
TTAATCCTCG CTACGCTGTT GCTGTTTTGC GCAGTGCTAC TGATCGTGCT GGTGGGAACG
CTTTATCCGA TGATTTACGG TCTGCTGGGC TGGGGACGCC TCTCCGTTGG CGCGCCGTAT
TTTAACCGCG CGACGTTACC GTTTGGTCTG TTGATGCTGG TGGTGATTGT GCTGGCGACG
TTTGTCTCTG GCAAACGCGT GCAGCTTCCG GCGCTGGTAG CTCATGCGGG CGTGCTGTTA
TTTGCCGCTG GGATCGTGGT TTCCAGCGTC AGCCGTCAGG AGATCAGCCT GAATTTACAG
CCGGGTCAGC AGGTGACGCT GGCAGGATAC ACCTTCCGTT TTGAGCGCCT CGATCTGCAA
GCCAAAGGCA ATTACACCAG CGAAAAAGCG ATAGTGGCAC TGTTTGACCA TCAGCAACGC
ATTGGTGAAC TGATGCCGGA GCGGCGTTTT TACGAAGCAC GTCGTCAGCA AATGATGGAA
CCGTCAATTC GCTGGAACGG CATCCATGAC TGGTATGCGG TCATGGGTGA AAAAACCGGA
GCGGATCGTT ACGCTTTTCG CTTGTATGTA CAAAGCGGTG TGCGCTGGAT CTGGGGGGGA
GGATTGTTGA TGATTGCGGG CGCATTGTTA AGCGGATGGC GGGGGAGGAA GCGCGATGAA
TAA
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| Protein sequence | MLLSLGVNVL TPLTAFAGVR LRWPAMMRLT CIGILAQFAL LLLAFGVLTY CFLISDFSVI
YVAQHSYSLL SWELKLAAVW GGHEGSLLLW VLLLSAWSAL FAWHYRQQTD PLFPLTLAVL
SLMLAALLLF VVLWSDPFVR IFPPAIEGRD LNPMLQHPGL IFHPPLLYLG YGGLMVAASV
ALASLLRGEF DAASARICWR WALPGWSALT AGIILGSWWA YCELGWGGWW FWDPVENASL
LPWLSATALL HSLSLTRQRG IFRHWSLLLA IVTLMLSLLG TLIVRSGILV SVHAFALDNV
RAVPLFSLFA LISLASLALY GWRARDGGPA VRFSGLSREM LILATLLLFC AVLLIVLVGT
LYPMIYGLLG WGRLSVGAPY FNRATLPFGL LMLVVIVLAT FVSGKRVQLP ALVAHAGVLL
FAAGIVVSSV SRQEISLNLQ PGQQVTLAGY TFRFERLDLQ AKGNYTSEKA IVALFDHQQR
IGELMPERRF YEARRQQMME PSIRWNGIHD WYAVMGEKTG ADRYAFRLYV QSGVRWIWGG
GLLMIAGALL SGWRGRKRDE
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