Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E4583 |
Symbol | |
ID | 6272005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 4279109 |
End bp | 4280758 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641728360 |
Product | Na+/H+ antiporter |
Protein accession | YP_001882758 |
Protein GI | 187732608 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATCT TCTTCACCAT ACTGATAATG ACCCTCGTGG TCTCGCTGTC CGGGGTGGTC ACTCGTGTCA TGCCCTTTCA GATCCCGCTT CCGCTTATGC AAATCGCCAT CGGTGCGCTA CTGGCGTGGC CGACGTTTGG TTTGCATGTG GAGTTTGATC CTGAACTCTT TTTAGTCTTG TTTATCCCGC CGTTGCTGTT CGCTGATGGC TGGAAAACGC CGACCCGTGA ATTTCTCGAA CATGGTCGAG AGATTTTCGG CCTCGCGCTG GCGCTGGTGG TGGTCACCGT GGTCGGCATT GGCTTCCTTA TTTACTGGGT GGTGCCGGGC ATTCCGCTGA TCCCCGCCTT TGCGCTGGCG GCGGTACTTT CTCCGACCGA TGCTGTGGCG CTCTCCGGGA TTGTTGGCGA AGGGCGCATC CCGAAAAAAA TCATGGGCAT TTTGCAGGGC GAAGCGTTGA TGAATGACGC CTCCGGCCTG GTGTCGTTGA AGTTTGCCGT GGCAGTGGCG ATGGGGACGA TGATCTTCAC CGTCGGCGGT GCGACGGTCG AATTTATGAA AGTAGCCATT GGTGGTATTC TTGCCGGTTT TGTGGTGAGC TGGCTGTATG GTCGCTCGCT GCGATTCCTC AGCCGCTGGG GCGGTGATGA ACCCGCGACG CAGATCGTTC TGCTGTTCTT GCTGCCATTC GCTTCTTATC TGATTGCCGA ACATATTGGC GTTTCCGGCA TCCTCGCTGC GGTTGCCGCC GGGATGACCA TCACCCGCTC CGGTGTGATG CGCCGTGCGC CGCTGGCAAT GCGCCTGCGC GCAAACAGCA CCTGGGCGAT GCTGGAATTT GTCTTTAACG GCATGGTGTT CCTGCTGTTA GGTCTGCAGC TGCCGGGTAT TCTGGAGACG TCGCTGATGG CGGCAGAAAT CGACCCTAAC GTCGAAATCT GGATGCTGTT TACCGATATT ATTCTGATAT ATGCGGCGCT GATGCTGGTC CGTTTCGGCT GGCTGTGGAC GATGAAAAAG TTCAGCAACC GCTTCCTGAA GAAGAAGCCG ATGGAGTTTG GTTCGTGGAC CACACGAGAA ATCCTGATCG CGTCTTTCGC CGGGGTGCGT GGGGCGATCA CTCTGGCCGG TGTGCTCTCT ATCCCGCTGC TCTTGCCGGA TGGTAACGTC TTCCCGGCGC GCTATGAGCT GGTGTTCCTG GCGGCTGGCG TCATTCTCTT CTCGCTGTTT GTCGGCGTGG TGATGTTGCC TATTCTGCTA CAACACATTG AAGTCGCGGA TCATTCGCAA CAATTGAAAG AGGAACGTAT TGCGCGAGCG GCAACGGCAG AAGTGGCGAT TGTGGCGATC CAGAAAATGG AGGAGCGTCT GGCGGCGGAT ACCGAAGAGA ATATCGATAA CCAGCTGCTT ACGGAGGTCA GTTCTCGCGT CATTGGTAAC CTGCGTCGTC GCGCCGATGG ACGTAACGAC GTTGAAAGTT CCGTGCAGGA AGAGAACCTT GAGCGTCGCT TCCGTCTGGC GGCATTGCGT TCTGAACGTG CTGAACTGTA CCACCTGCGC GCCACGCGGG AGATCAGCAA CGAAACGCTG CAAAAATTAC TGCACGATCT CGATTTGCTT GAAGCGTTGC TAATTGAGGA AAATCAGTAA
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Protein sequence | MEIFFTILIM TLVVSLSGVV TRVMPFQIPL PLMQIAIGAL LAWPTFGLHV EFDPELFLVL FIPPLLFADG WKTPTREFLE HGREIFGLAL ALVVVTVVGI GFLIYWVVPG IPLIPAFALA AVLSPTDAVA LSGIVGEGRI PKKIMGILQG EALMNDASGL VSLKFAVAVA MGTMIFTVGG ATVEFMKVAI GGILAGFVVS WLYGRSLRFL SRWGGDEPAT QIVLLFLLPF ASYLIAEHIG VSGILAAVAA GMTITRSGVM RRAPLAMRLR ANSTWAMLEF VFNGMVFLLL GLQLPGILET SLMAAEIDPN VEIWMLFTDI ILIYAALMLV RFGWLWTMKK FSNRFLKKKP MEFGSWTTRE ILIASFAGVR GAITLAGVLS IPLLLPDGNV FPARYELVFL AAGVILFSLF VGVVMLPILL QHIEVADHSQ QLKEERIARA ATAEVAIVAI QKMEERLAAD TEENIDNQLL TEVSSRVIGN LRRRADGRND VESSVQEENL ERRFRLAALR SERAELYHLR ATREISNETL QKLLHDLDLL EALLIEENQ
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